Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40056
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    24   1.8  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    24   1.8  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   3.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     23   4.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    23   4.2  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   7.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 549 CGSSPYCSEKPPSSLFRGSSCN 484
           C   P C++ P  ++  G SCN
Sbjct: 150 CQKHPLCNDDPNGNVPLGKSCN 171


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 402 AAKVPPPPPVRTTSQLSGTKYG 467
           A+KV P PP++  ++ S  K+G
Sbjct: 35  ASKVGPAPPIKFINKSSTDKFG 56


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +1

Query: 163 MPDLTEGADGNKENSNKEKR 222
           M DLTEGA     N + EKR
Sbjct: 133 MQDLTEGAKNMTINDDLEKR 152


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = -1

Query: 425  WWWRNFSSGQYFTGATMKTLAHKLTSFQVRVRPT 324
            WW    +S  + T  T +T   + T+     RPT
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTRPT 1075


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +2

Query: 806  FGLAPFFPSSHGILVSHFTSTL 871
            F  A FFP  + ++ S FTS++
Sbjct: 1073 FNAAGFFPIDYTLVFSKFTSSI 1094


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 459 KYGYVDHNNYN 491
           +YGY +H NYN
Sbjct: 61  QYGYHNHQNYN 71


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 459 KYGYVDHNNYN 491
           +YGY +H NYN
Sbjct: 61  QYGYHNHQNYN 71


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 459 KYGYVDHNNYN 491
           +YGY +H NYN
Sbjct: 61  QYGYHNHQNYN 71


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 459 KYGYVDHNNYN 491
           +YGY +H NYN
Sbjct: 61  QYGYHNHQNYN 71


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 372 FHGSAGKILTAAKVPPPPPVRT 437
           FH +A  +      PPPPPV T
Sbjct: 151 FHAAATSL--PLHYPPPPPVYT 170


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,280
Number of Sequences: 336
Number of extensions: 5037
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)