Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40054
         (600 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   143   4e-36
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.5  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    24   3.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   10.0 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   10.0 

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  143 bits (346), Expect = 4e-36
 Identities = 68/85 (80%), Positives = 75/85 (88%)
 Frame = +2

Query: 254 LVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGS 433
           +VF+ +R+ILPKP    R  NKQKRPRS  +T+VYDAILEDLVFPAE+VGKRIRVKLDGS
Sbjct: 90  VVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGKRIRVKLDGS 149

Query: 434 QLIKVHLDKNQQTTIEHKVDTFQSV 508
           QLIKVHLDKNQQTTIEHKVDTF SV
Sbjct: 150 QLIKVHLDKNQQTTIEHKVDTFASV 174



 Score =  132 bits (320), Expect = 6e-33
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = +3

Query: 3   KIIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMP 182
           K+IKA   E D+FET I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+P
Sbjct: 6   KVIKAGNGEPDAFETQIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVP 65

Query: 183 KLKAFQKIQIRLVRELEKKFSGKH 254
           K KAFQK+Q RLVRELEKKFSGKH
Sbjct: 66  KQKAFQKVQTRLVRELEKKFSGKH 89



 Score = 35.9 bits (79), Expect = 0.001
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 511 KKLTGREVTFEFPEPYL 561
           KKLTGR+VTFEFPE YL
Sbjct: 176 KKLTGRDVTFEFPENYL 192


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +2

Query: 344 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 475
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 17/44 (38%), Positives = 28/44 (63%)
 Frame = +2

Query: 344 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTT 475
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 24.2 bits (50), Expect = 3.3
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -1

Query: 426 SNLTLMRLPTISAGKTKSSRIASYTEVNVLERGLFCLLATRVLWLGLGRIL 274
           +N  L+ +P  +   T SSR       +     L CLLAT V+W   G++L
Sbjct: 54  ANSRLVTVPAPAKELTDSSRSGGLPSSSS-SSSLSCLLATIVMWC-TGQVL 102


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 133 KLNYTIRSRSSSMCR 177
           + N TIRSRSSS+ R
Sbjct: 271 RTNSTIRSRSSSLSR 285


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 22.6 bits (46), Expect = 10.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 364  SIVHRGQCP*AWPLLFVSNTSFV 296
            SIVHR +     PLL V+  +FV
Sbjct: 1012 SIVHRQEIEDMLPLLLVATCAFV 1034


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,608
Number of Sequences: 2352
Number of extensions: 12114
Number of successful extensions: 38
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)