Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40050
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    25   0.59 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   1.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   1.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    25   1.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    25   1.0  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   4.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   4.2  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   9.7  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   9.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.7  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   9.7  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 134 YIFIFSYGFSDSLFYFGRFFNFYHC 60
           Y++I S G     +Y GR F +Y C
Sbjct: 133 YLWISSVGVRMFQYYIGRSFTYYVC 157


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 665 VQKLSDSVWKMGALAEIGTTICIESCPDI 751
           V+K    +WKM +L+E  +    E+CP I
Sbjct: 141 VRKCLYKLWKMPSLSEFLSLFGTETCPAI 169


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +2

Query: 665 VQKLSDSVWKMGALAEIGTTICIESCPDI 751
           V+K    +WKM +L+E  +    E+CP I
Sbjct: 141 VRKCLYKLWKMPSLSEFLSLFGTETCPAI 169


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 517 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVNH 618
           L + N+  +LT    K  W+K L  L ++Q  N+
Sbjct: 75  LYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNN 108


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 517 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVNH 618
           L + N+  +LT    K  W+K L  L ++Q  N+
Sbjct: 75  LYVQNIYTVLTALTKKPLWFKLLKNLKMVQNHNN 108



 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 517 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 615
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 388 LLILNVHTILTTITKRNQWCKLLENLKLDRENN 420


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 517 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 615
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 68  LLILNVHTILTTITKRNQWCKLLENLKLDRENN 100


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 517 LSIHNLQKILTTAY*KNYWYKFLVYLIIIQKVN 615
           L I N+  ILTT   +N W K L  L + ++ N
Sbjct: 68  LLILNVHTILTTITKRNQWCKLLENLKLDRENN 100


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 84  SKVKQRITEPVTKDENVPLPPVRMSSDPA 170
           S    R  +P TK +  P P  R + +PA
Sbjct: 243 SSGSSRSHQPATKSKPRPAPASRNAPEPA 271


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +2

Query: 620 FRSCVYPYGISNRIWVQKLS 679
           +R C  PY + N+ W   LS
Sbjct: 256 YRYCYRPYPVYNQWWSGPLS 275


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 185  MDKQTEGTRLCDERYQSSSQAFN 253
            ++K T    LC  RYQ  ++A+N
Sbjct: 1449 VEKYTLEKLLCGTRYQVYAKAYN 1471


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -3

Query: 830 CPKVWPGT*WNLGISPINGAPTNDPGEYLDRI 735
           C + W G   N+     +  P  + G  +DRI
Sbjct: 94  CKEGWEGALCNINTDDCSPNPCRNNGSCVDRI 125


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 202 LCLFIHFTCLGAGSLDIRTGG 140
           L  F HF CL   +++IR  G
Sbjct: 26  LVTFAHFICLFPITINIRKNG 46


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 135 PLPPVRMSSDPAPKQ 179
           P PP ++S+ P P Q
Sbjct: 330 PPPPYQISAQPTPSQ 344


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 235,868
Number of Sequences: 336
Number of extensions: 6158
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)