Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40050
         (880 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p pro...   144   1e-34
AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA...   144   1e-34
AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p pro...    31   2.8  
AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA...    31   2.8  
AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p pro...    30   3.7  
AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like p...    30   3.7  
AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-P...    30   3.7  
AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p pro...    29   6.4  
AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA...    29   6.4  
X75760-1|CAA53387.1|  428|Drosophila melanogaster LRR47 protein.       29   8.5  
AY121646-1|AAM51973.1|  255|Drosophila melanogaster LD17077p pro...    29   8.5  
AY058306-1|AAL13535.1|  428|Drosophila melanogaster GH06740p pro...    29   8.5  
AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-P...    29   8.5  
AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-P...    29   8.5  
AE014134-1912|AAF52970.1|  428|Drosophila melanogaster CG6098-PA...    29   8.5  
AE014134-156|AAF51454.2|  255|Drosophila melanogaster CG3876-PA ...    29   8.5  

>AY118916-1|AAM50776.1|  356|Drosophila melanogaster LD22010p
           protein.
          Length = 356

 Score =  144 bits (350), Expect = 1e-34
 Identities = 93/228 (40%), Positives = 120/228 (52%), Gaps = 3/228 (1%)
 Frame = +3

Query: 108 EPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMKILRN*CHIIR 287
           E V  DEN PLPP R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLMK ++      R
Sbjct: 17  EIVPLDENPPLPPQRSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHR 76

Query: 288 QSPKWREAKTCMLLMKLAR*KTATNAFYLKEER*-GIYI-CGYLIYPMDQVLNFWWKTFI 461
              K   +KT  ++ ++   K    A   +  R   +Y+              F  +   
Sbjct: 77  PESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIH 136

Query: 462 LWGN*K*LALFER-I*ALLSFDPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPFFDHVYT 638
                K      R    LLSFD +F + PH  LLKEL VQ + VPN+HPKSQPF DHV+T
Sbjct: 137 TMAELKMTGNCLRGSRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHPKSQPFVDHVFT 196

Query: 639 LMVLVTEFGFRNYQILSGRWVL*LK*GPRFVLNPVQIFSRIVGGCPIY 782
              L     FRN+QILS    L  + GPR+V+NPV+IF     G  I+
Sbjct: 197 FTYLDKRIWFRNFQILSEDGGL-SEVGPRYVMNPVKIFDGSFTGKTIW 243



 Score =  126 bits (304), Expect = 4e-29
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = +2

Query: 254 EDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISNI--PNG 427
           +DIK LMPHH+ ESKMERSK L VVNE+ EMK+CNK +LFEGR+ RDLYMWISN     G
Sbjct: 66  KDIKTLMPHHRPESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTG 125

Query: 428 PSAKFLVENIYTMGELKMTG 487
           PSAKFL+ENI+TM ELKMTG
Sbjct: 126 PSAKFLIENIHTMAELKMTG 145


>AE014296-815|AAF47877.3|  356|Drosophila melanogaster CG11583-PA
           protein.
          Length = 356

 Score =  144 bits (350), Expect = 1e-34
 Identities = 93/228 (40%), Positives = 120/228 (52%), Gaps = 3/228 (1%)
 Frame = +3

Query: 108 EPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMKILRN*CHIIR 287
           E V  DEN PLPP R S D  PK+ KW+N+QRVLVF+ RGI+HR RHLMK ++      R
Sbjct: 17  EIVPLDENPPLPPQRSSDDVVPKKEKWVNKQRVLVFSARGISHRDRHLMKDIKTLMPHHR 76

Query: 288 QSPKWREAKTCMLLMKLAR*KTATNAFYLKEER*-GIYI-CGYLIYPMDQVLNFWWKTFI 461
              K   +KT  ++ ++   K    A   +  R   +Y+              F  +   
Sbjct: 77  PESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTGPSAKFLIENIH 136

Query: 462 LWGN*K*LALFER-I*ALLSFDPQFTKDPHYCLLKELLVQIFGVPNYHPKSQPFFDHVYT 638
                K      R    LLSFD +F + PH  LLKEL VQ + VPN+HPKSQPF DHV+T
Sbjct: 137 TMAELKMTGNCLRGSRPLLSFDSKFDELPHLKLLKELFVQTYSVPNHHPKSQPFVDHVFT 196

Query: 639 LMVLVTEFGFRNYQILSGRWVL*LK*GPRFVLNPVQIFSRIVGGCPIY 782
              L     FRN+QILS    L  + GPR+V+NPV+IF     G  I+
Sbjct: 197 FTYLDKRIWFRNFQILSEDGGL-SEVGPRYVMNPVKIFDGSFTGKTIW 243



 Score =  126 bits (304), Expect = 4e-29
 Identities = 59/80 (73%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = +2

Query: 254 EDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISNI--PNG 427
           +DIK LMPHH+ ESKMERSK L VVNE+ EMK+CNK +LFEGR+ RDLYMWISN     G
Sbjct: 66  KDIKTLMPHHRPESKMERSKTLSVVNEMCEMKHCNKAMLFEGRRKRDLYMWISNTSGSTG 125

Query: 428 PSAKFLVENIYTMGELKMTG 487
           PSAKFL+ENI+TM ELKMTG
Sbjct: 126 PSAKFLIENIHTMAELKMTG 145


>AY071145-1|AAL48767.1|  520|Drosophila melanogaster RE18068p
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 48  IKFKAMVKVKKPSKVKQRITEPVTKDENVPLPPVRMS 158
           IK+K  V +++P    +R T P T  +N+PL P++ S
Sbjct: 122 IKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRS 158


>AE014297-1231|AAF54580.2|  520|Drosophila melanogaster CG4674-PA
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = +3

Query: 48  IKFKAMVKVKKPSKVKQRITEPVTKDENVPLPPVRMS 158
           IK+K  V +++P    +R T P T  +N+PL P++ S
Sbjct: 122 IKYKMRVLIQRPWTFDERHTIPFTVVKNMPLQPMQRS 158


>AY051991-1|AAK93415.1| 1010|Drosophila melanogaster LD45758p
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 81  PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 212
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AF520716-1|AAM55245.1| 1010|Drosophila melanogaster MICAL-like
           protein protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 81  PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 212
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AE014296-2228|AAF49857.2| 1010|Drosophila melanogaster CG11259-PA
           protein.
          Length = 1010

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +3

Query: 81  PSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 212
           P+     IT P+ K    PLPP++   D  P   K  + Q+ L+
Sbjct: 615 PTTSLSSITSPMRKKRQAPLPPIQTDFDSDPGFSKLSDEQKALL 658


>AY060713-1|AAL28261.1|  596|Drosophila melanogaster GH15479p
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 102 ITEPVTKDENVPLPPVRMSS---DPAPKQVKWIN 194
           I  P  + E+VPLPP  MSS   D +P  V+ IN
Sbjct: 191 IAPPAPRPEDVPLPPPMMSSLPTDGSPDDVQSIN 224


>AE014296-3503|AAF51694.1|  596|Drosophila melanogaster CG9389-PA
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = +3

Query: 102 ITEPVTKDENVPLPPVRMSS---DPAPKQVKWIN 194
           I  P  + E+VPLPP  MSS   D +P  V+ IN
Sbjct: 191 IAPPAPRPEDVPLPPPMMSSLPTDGSPDDVQSIN 224


>X75760-1|CAA53387.1|  428|Drosophila melanogaster LRR47 protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 GTENDWHCLRGSRLC 513
           GT+NDW  LRG++LC
Sbjct: 212 GTQNDWCWLRGTKLC 226


>AY121646-1|AAM51973.1|  255|Drosophila melanogaster LD17077p
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 215 CDERYQSSSQAFNEDIKK--LMPHHKTESKMERSKNLYVVNEIS 340
           C E Y   S   N +I+K  L+PH   E  +   +NL++VN I+
Sbjct: 151 CSECYMLVSYLLNRNIQKTVLLPHE--EKSLRYKRNLFLVNVIA 192


>AY058306-1|AAL13535.1|  428|Drosophila melanogaster GH06740p
           protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 GTENDWHCLRGSRLC 513
           GT+NDW  LRG++LC
Sbjct: 212 GTQNDWCWLRGTKLC 226


>AE014134-3513|AAF57219.3|  819|Drosophila melanogaster CG12548-PB,
           isoform B protein.
          Length = 819

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 96  QRITEPVTKDENVPLPPVRMSSDPAPKQVKWINR 197
           QR+ EPV++ E VP PP   +  P P   +  +R
Sbjct: 11  QRLPEPVSEHEAVPPPPPTAAGRPRPPTSQLFSR 44


>AE014134-3512|AAF57218.3|  852|Drosophila melanogaster CG12548-PA,
           isoform A protein.
          Length = 852

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +3

Query: 96  QRITEPVTKDENVPLPPVRMSSDPAPKQVKWINR 197
           QR+ EPV++ E VP PP   +  P P   +  +R
Sbjct: 11  QRLPEPVSEHEAVPPPPPTAAGRPRPPTSQLFSR 44


>AE014134-1912|AAF52970.1|  428|Drosophila melanogaster CG6098-PA
           protein.
          Length = 428

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +1

Query: 469 GTENDWHCLRGSRLC 513
           GT+NDW  LRG++LC
Sbjct: 212 GTQNDWCWLRGTKLC 226


>AE014134-156|AAF51454.2|  255|Drosophila melanogaster CG3876-PA
           protein.
          Length = 255

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +2

Query: 215 CDERYQSSSQAFNEDIKK--LMPHHKTESKMERSKNLYVVNEIS 340
           C E Y   S   N +I+K  L+PH   E  +   +NL++VN I+
Sbjct: 151 CSECYMLVSYLLNRNIQKTVLLPHE--EKSLRYKRNLFLVNVIA 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,149,072
Number of Sequences: 53049
Number of extensions: 995354
Number of successful extensions: 2680
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2676
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)