Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40048
         (248 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.069
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   0.49 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   0.85 
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   2.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   2.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   3.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    20   4.5  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    20   4.5  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   4.5  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    19   6.0  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    19   6.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    19   6.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    19   7.9  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.069
 Identities = 17/50 (34%), Positives = 21/50 (42%)
 Frame = +1

Query: 31   WSPRGWVPPXPPISAVKQ*CVSV*RVGQPL*L*LRP*NLYLKVGGAFTSW 180
            W P  W PP PP S              PL   L+P + Y K+   FT+W
Sbjct: 1369 WQPTEWHPPIPPTSE-----------KPPLPEELKPQSGYFKIVCYFTNW 1407


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 23.0 bits (47), Expect = 0.49
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 212 GVKWLLEPIDIHDVNAPPT 156
           G  W L+    HDV AP T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 0.85
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 105 GGAAVVTIIETLELISQGGWRI 170
           G A ++   E +EL  +GGW++
Sbjct: 292 GEAGMLGYNEIVELQKEGGWKV 313


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = -1

Query: 149 YKF*GLNYSYNGC 111
           Y F G  Y Y GC
Sbjct: 17  YPFQGTTYKYTGC 29


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 31  WSPRGWVPPXPPIS 72
           +SP G +PP P +S
Sbjct: 224 FSPTGLIPPHPGLS 237


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 31  WSPRGWVPPXPPIS 72
           +SP G +PP P +S
Sbjct: 116 FSPTGLIPPHPGLS 129


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 2.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 29  CGVRAGGYH 55
           CG RA GYH
Sbjct: 191 CGDRASGYH 199



 Score = 20.2 bits (40), Expect = 3.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 22  DLLWSPRGWVPPXPP 66
           D L SP G VPP  P
Sbjct: 105 DWLSSPSGNVPPLTP 119


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 6/18 (33%), Positives = 10/18 (55%)
 Frame = +2

Query: 173 RRGCLWAPVTTSHQVGSE 226
           R+G  W+P  T+    +E
Sbjct: 103 RKGLFWSPAATAAATATE 120


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 10/27 (37%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
 Frame = -3

Query: 246 CLDGWTSSEPT----WCEVVTGAHRHP 178
           C+ G   +E T    W E V G  +HP
Sbjct: 128 CIGGLLYNERTHSCDWPENVDGCQKHP 154


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 27  LVESARVGTTXPAYFCREAVMRFSLKG 107
           L +  R+ +    Y C+  ++RFS  G
Sbjct: 93  LTKHLRIHSGEKPYECKLCLLRFSQSG 119


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 27  LVESARVGTTXPAYFCREAVMRFSLKG 107
           L +  R+ +    Y C+  ++RFS  G
Sbjct: 349 LTKHLRIHSGEKPYECKLCLLRFSQSG 375


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 107 WGSRCNYN*DLRT 145
           WG+  +YN DL T
Sbjct: 149 WGTNESYNLDLTT 161


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 203 WLLEPIDIHDVNAPPTLRYK 144
           WL  P  + +   P +LR+K
Sbjct: 7   WLTPPHSLGNTVTPVSLRFK 26


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +3

Query: 3   RYLQVVGPLVESARVGTTXPAYFCREAVMRFSLKGGAAVVTIIETLE 143
           +++QV   L    RV T    Y C    M+FS         +I T E
Sbjct: 199 QFVQVAN-LRRHLRVHTGERPYGCEHCSMKFSDSNQLKAHVLIHTNE 244


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 218 PPGVKWLLEPID 183
           PP  +W+LEP D
Sbjct: 698 PP--RWILEPTD 707


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,454
Number of Sequences: 336
Number of extensions: 1304
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)