Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40047
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 95 6e-20
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 95 6e-20
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 1.1
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 1.1
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 2.5
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 2.5
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 30 2.5
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 3.3
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 29 5.8
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 29 5.8
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 95.1 bits (226), Expect = 6e-20
Identities = 50/113 (44%), Positives = 65/113 (57%)
Frame = +3
Query: 465 CRIQIP*GTR*GVHDCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 644
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 254 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 313
Query: 645 FPLSSDLAVDYEFLRLEETWILSSEETKKIFPRLLLRGNETDKKRVENFNPGQ 803
F LS D VDYE + S K++ L+ G+ KK FN G+
Sbjct: 314 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKK----FNQGK 362
Score = 91.1 bits (216), Expect = 1e-18
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMTV 513
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM+
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 269
Query: 514 TLL 522
L+
Sbjct: 270 NLI 272
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +2
Query: 47 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELA 205
Q+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL+
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELS 170
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 95.1 bits (226), Expect = 6e-20
Identities = 50/113 (44%), Positives = 65/113 (57%)
Frame = +3
Query: 465 CRIQIP*GTR*GVHDCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 644
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 262 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 321
Query: 645 FPLSSDLAVDYEFLRLEETWILSSEETKKIFPRLLLRGNETDKKRVENFNPGQ 803
F LS D VDYE + S K++ L+ G+ KK FN G+
Sbjct: 322 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKK----FNQGK 370
Score = 91.1 bits (216), Expect = 1e-18
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMTV 513
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM+
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 277
Query: 514 TLL 522
L+
Sbjct: 278 NLI 280
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +2
Query: 2 TLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYD 181
+LADV V LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++
Sbjct: 111 SLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFN 170
Query: 182 PKKYQELA 205
K+ EL+
Sbjct: 171 QAKFTELS 178
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 95.1 bits (226), Expect = 6e-20
Identities = 50/113 (44%), Positives = 65/113 (57%)
Frame = +3
Query: 465 CRIQIP*GTR*GVHDCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 644
C + P CNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 287 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 346
Query: 645 FPLSSDLAVDYEFLRLEETWILSSEETKKIFPRLLLRGNETDKKRVENFNPGQ 803
F LS D VDYE + S K++ L+ G+ KK FN G+
Sbjct: 347 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEGDFGGKK----FNQGK 395
Score = 91.1 bits (216), Expect = 1e-18
Identities = 39/63 (61%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
Frame = +1
Query: 337 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKVFMTV 513
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L FM+
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLAFMSC 302
Query: 514 TLL 522
L+
Sbjct: 303 NLI 305
Score = 66.1 bits (154), Expect = 3e-11
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +2
Query: 2 TLADVIVFSTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYD 181
+LADV V LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++
Sbjct: 136 SLADVSVALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFN 195
Query: 182 PKKYQELA 205
K+ EL+
Sbjct: 196 QAKFTELS 203
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 50 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 202
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 50 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 202
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 640 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 530
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 640 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 530
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 643 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 530
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 643 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 530
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 370 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMTVT 516
D+ V+ N+ + K P + KF PENY +W Y +E ++ +++ T
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRT 90
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 580 CLVKTTIPPSPECGCGAEKNS 642
C + PP P+CGCG +K S
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS 83
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 31 TAACFPARARPERPFVADKRSALVPDRRPPATSVGRRRLAHALCGSSYIRP*KVPGVSWC 210
T A P R P R A + +A P PP T R A + ++ P PGV
Sbjct: 46 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAP---PGVDMA 102
Query: 211 T 213
T
Sbjct: 103 T 103
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.7 bits (61), Expect = 5.8
Identities = 19/61 (31%), Positives = 24/61 (39%)
Frame = +1
Query: 31 TAACFPARARPERPFVADKRSALVPDRRPPATSVGRRRLAHALCGSSYIRP*KVPGVSWC 210
T A P R P R A + +A P PP T R A + ++ P PGV
Sbjct: 175 TPAAPPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAP---PGVDMA 231
Query: 211 T 213
T
Sbjct: 232 T 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,799,924
Number of Sequences: 27780
Number of extensions: 462580
Number of successful extensions: 1559
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1555
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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