Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40045
         (882 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   4.2  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.5  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.5  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.5  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.5  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           22   5.5  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.5  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 130 NPHSFRLELYQGFDWQH*LSKT*VIIKKKNCE 225
           NP+ F   +Y+ F  +H L      I  ++CE
Sbjct: 180 NPYCFNSSVYKVFPVEHLLFIANAFITSQSCE 211


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +3

Query: 591 LSFYCKLINKLY 626
           L F CK INKLY
Sbjct: 221 LVFMCKKINKLY 232


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 154 PQIYPWMKRVHLG 166


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 820 P*IWSWRSRVHLG 858
           P I+ W  RVHLG
Sbjct: 198 PQIYPWMKRVHLG 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,655
Number of Sequences: 336
Number of extensions: 3399
Number of successful extensions: 20
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)