Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40042
         (896 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.61 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    24   1.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   4.3  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    22   5.7  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    22   5.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.5  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    21   9.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.4 bits (53), Expect = 0.61
 Identities = 9/34 (26%), Positives = 22/34 (64%)
 Frame = -2

Query: 169 LLSVAATAGWFSPRVFSRMDRASFSRLAASLYLF 68
           ++S++ T G+F   + S +++ASF ++  ++  F
Sbjct: 367 VVSLSGTFGFFGTHILSYINKASFKKIVNTVATF 400


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = +1

Query: 556 EREENKHLQKENAPYGDYGGWHNAAKVDSPTVTTTLK 666
           +RE +    ++   Y  YG W    +   P VT T++
Sbjct: 215 QREYSPTFTQQQTQYSQYGSWFLPHQPIYPAVTATVQ 251


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 800 IRSIAFRGQHGDPIP 844
           I  IAF  ++GDPIP
Sbjct: 236 IAEIAFAYKYGDPIP 250


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 416 NNLASCYLKQGKYKEAETLYKQVLTRA 496
           +N   C LK+GK  E   + + V+  A
Sbjct: 41  DNYLQCLLKKGKCNEEAAILRDVIPDA 67


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +2

Query: 416 NNLASCYLKQGKYKEAETLYKQVLTRA 496
           +N   C LK+GK  E   + + V+  A
Sbjct: 41  DNYLQCLLKKGKCNEEAAILRDVIPDA 67


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +3

Query: 681 VPAPRANYDAADTVRRTGPFGPGKD 755
           +PA RA YD    +R  G +    D
Sbjct: 57  IPAKRAAYDCEGVIRHHGQWNYSPD 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 279  ATSGWSRPTRP 247
            +TS W +PT+P
Sbjct: 1162 STSSWQKPTKP 1172


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = -3

Query: 312 WQSSARLLSCLATSGWSRPTRPRGCT 235
           WQS+        T+  + P RP  CT
Sbjct: 120 WQSATSGGGANLTNSLTGPVRPAACT 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,010
Number of Sequences: 336
Number of extensions: 3374
Number of successful extensions: 17
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)