Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40040
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450 pr...    24   5.3  
AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450 CY...    24   5.3  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = -2

Query: 656 NVDLNLYLLRYYISVSFQISNIMNQEN*HPSIYRFRKYIDSISDIDTRYKIRFDT 492
           N+D+ + L  YYISV + I  +    N          Y D I +I  R K  F T
Sbjct: 189 NIDIGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYT 243


>AY193727-1|AAO24698.1|  492|Anopheles gambiae cytochrome P450
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 144 EALRSLPGQPVLNKFQYTSYKL 209
           E LR  PG P+LN+     YK+
Sbjct: 357 ETLRKYPGLPILNRECTIDYKV 378


>AF487780-1|AAL96667.1|  490|Anopheles gambiae cytochrome P450
           CYP6Z2 protein protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 144 EALRSLPGQPVLNKFQYTSYKL 209
           E LR  PG P+LN+     YK+
Sbjct: 357 ETLRKYPGLPILNRECTIDYKV 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,515
Number of Sequences: 2352
Number of extensions: 16469
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)