Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40039
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 177 6e-45
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 177 6e-45
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 177 1e-44
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 177 1e-44
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 175 3e-44
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 175 5e-44
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 87 1e-17
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 87 1e-17
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 61 9e-10
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 61 9e-10
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 61 9e-10
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 61 9e-10
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 59 4e-09
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 59 4e-09
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 59 4e-09
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 59 4e-09
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 58 8e-09
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 58 1e-08
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 58 1e-08
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 54 1e-07
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 54 1e-07
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 54 1e-07
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 54 1e-07
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 49 4e-06
U80845-1|AAK39181.1| 1217|Caenorhabditis elegans Prion-like-(q/n... 28 7.7
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 177 bits (432), Expect = 6e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRG+KMAATF+GNSTAIQELF
Sbjct: 355 DIPPRGVKMAATFVGNSTAIQELF 378
Score = 103 bits (246), Expect = 2e-22
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 177 bits (432), Expect = 6e-45
Identities = 80/84 (95%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRGLKMAATF+GNSTAIQELF
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELF 378
Score = 102 bits (245), Expect = 3e-22
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 177 bits (430), Expect = 1e-44
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRGLKM+ATFIGNSTAIQELF
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELF 378
Score = 103 bits (246), Expect = 2e-22
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 177 bits (430), Expect = 1e-44
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRGLKM+ATFIGNSTAIQELF
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELF 378
Score = 103 bits (246), Expect = 2e-22
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 175 bits (427), Expect = 3e-44
Identities = 79/84 (94%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRGLKMAATF+GNSTAIQELF
Sbjct: 355 DIPPRGLKMAATFVGNSTAIQELF 378
Score = 102 bits (245), Expect = 3e-22
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 175 bits (425), Expect = 5e-44
Identities = 78/84 (92%), Positives = 84/84 (100%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKNMMAACDPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVC
Sbjct: 295 DAKNMMAACDPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVC 354
Query: 182 DIPPRGLKMAATFIGNSTAIQELF 253
DIPPRGLKM+ATFIGNSTAIQELF
Sbjct: 355 DIPPRGLKMSATFIGNSTAIQELF 378
Score = 103 bits (246), Expect = 2e-22
Identities = 46/47 (97%), Positives = 47/47 (100%)
Frame = +1
Query: 253 QRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
+RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 379 KRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VC
Sbjct: 294 DAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVC 352
Query: 182 DIPPRGLKMAATFIGNSTAIQE 247
DIP RGLK +ATFI NSTAIQE
Sbjct: 353 DIPSRGLKTSATFIANSTAIQE 374
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1
Query: 250 VQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
++RIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/82 (48%), Positives = 60/82 (73%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
DAKN+M C+ G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VC
Sbjct: 294 DAKNIMT-CNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVC 352
Query: 182 DIPPRGLKMAATFIGNSTAIQE 247
DIP RGLK +ATFI NSTAIQE
Sbjct: 353 DIPSRGLKTSATFIANSTAIQE 374
Score = 71.7 bits (168), Expect = 6e-13
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +1
Query: 250 VQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 393
++RIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 376 LKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E ++
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 299 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 358
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E ++
Sbjct: 359 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 388
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E ++
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + P
Sbjct: 300 NQMVKCDPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQP 359
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E ++
Sbjct: 360 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWA 389
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 59.3 bits (137), Expect = 4e-09
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + P
Sbjct: 298 NQMVKCDPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 58.0 bits (134), Expect = 8e-09
Identities = 23/64 (35%), Positives = 37/64 (57%)
Frame = +2
Query: 2 DAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVC 181
+A N M CDP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K +
Sbjct: 292 EASNQMVKCDPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLN 351
Query: 182 DIPP 193
PP
Sbjct: 352 YQPP 355
Score = 54.4 bits (125), Expect = 1e-07
Identities = 21/48 (43%), Positives = 34/48 (70%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A QR+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 382 AWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + P
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
N M CDPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + P
Sbjct: 298 NQMVKCDPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQP 357
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P + A + N+TAI E +S
Sbjct: 358 PTVVPGGDLAKVPRAVCMLSNTTAIAEAWS 387
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 385 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIP 190
+ M CDPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K + P
Sbjct: 300 SQMVKCDPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQP 359
Query: 191 P--------RGLKMAATFIGNSTAIQELFS 256
P L+ A + N+TAIQE ++
Sbjct: 360 PTVVPGGDMAKLQRAVCMLSNTTAIQEAWA 389
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 390 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Frame = +2
Query: 17 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP- 193
M CDPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K + PP
Sbjct: 307 MVKCDPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPT 366
Query: 194 -------RGLKMAATFIGNSTAIQELFS 256
L+ A + N+TAI E ++
Sbjct: 367 VVPGADLSKLQRAVCMLSNTTAIAEAWA 394
Score = 52.8 bits (121), Expect = 3e-07
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 395 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 396 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 17 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 193
M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 308 MVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPP 366
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/48 (43%), Positives = 33/48 (68%)
Frame = +1
Query: 247 AVQRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
A R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 22 AWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/45 (44%), Positives = 32/45 (71%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 368 RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +2
Query: 17 MAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP 193
M CDPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP
Sbjct: 280 MVKCDPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPP 338
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 49.2 bits (112), Expect = 4e-06
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 256 RISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 390
R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 393 RLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 NMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---C 181
N M CDP G+Y+ V ++RG + K+V+ + +++ K FV+W P K +
Sbjct: 303 NQMVKCDPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQA 362
Query: 182 DIPPRG-----LKMAATFIGNSTAIQELFS 256
I G + A + N+TAI E ++
Sbjct: 363 PITVEGGDLAKVHRAVCMLSNTTAIAEAWA 392
>U80845-1|AAK39181.1| 1217|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 15
protein.
Length = 1217
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 100 RANA*HPKQELLILRGMDPQQREDRRVRHSPSWSQDGRHLHRKLHRHP 243
R N P+Q+ + P Q + R P Q GR +H + R P
Sbjct: 805 RMNLAPPQQQQQHHQNQPPMQGNPQSDRQMPQMQQPGRQIHPNIKRQP 852
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,104
Number of Sequences: 27780
Number of extensions: 368338
Number of successful extensions: 1032
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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