Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40036
(890 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 88 9e-18
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 88 9e-18
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 80 2e-15
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 73 4e-13
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 68 8e-12
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 67 2e-11
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 67 2e-11
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 66 4e-11
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 65 6e-11
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 65 6e-11
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 62 5e-10
U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek (dictyo... 33 0.27
AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek (dictyos... 33 0.27
Z22181-13|CAA80184.3| 632|Caenorhabditis elegans Hypothetical p... 29 5.9
U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical pr... 29 5.9
U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical pr... 29 5.9
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 29 5.9
U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated p... 28 7.8
U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated p... 28 7.8
M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related... 28 7.8
AF000191-3|AAB52882.1| 522|Caenorhabditis elegans Mediator prot... 28 7.8
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 87.8 bits (208), Expect = 9e-18
Identities = 38/82 (46%), Positives = 59/82 (71%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+DL+VG++AEK L GSL+GPT + +Q+ RTR ADR++Y + F++ QL+E+R
Sbjct: 595 DVDLLVGVLAEKPLKGSLVGPTMACIIGKQMQRTRRADRFWYENYFAQSGFNEAQLSEIR 654
Query: 183 RVSLARLICDNTDMKQLQRDVF 248
LA +IC N D++++QR+VF
Sbjct: 655 NTKLAEIICSNIDIRRIQRNVF 676
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+DL G+++E+ L G+LLG T + + EQ R + DR++Y + N A F+ QL E+R
Sbjct: 1311 DVDLFPGLVSERPLRGALLGTTMSCIIAEQFGRLKKCDRFYYENDNSAAKFTPGQLNEIR 1370
Query: 183 RVSLARLICDNTD-MKQLQRDVFE 251
+V LA + C N+ +K +Q +VF+
Sbjct: 1371 KVKLASIFCSNSKYLKTIQPNVFD 1394
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical
protein T06D8.10 protein.
Length = 1490
Score = 87.8 bits (208), Expect = 9e-18
Identities = 38/82 (46%), Positives = 59/82 (71%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+DL+VG++AEK L GSL+GPT + +Q+ RTR ADR++Y + F++ QL+E+R
Sbjct: 595 DVDLLVGVLAEKPLKGSLVGPTMACIIGKQMQRTRRADRFWYENYFAQSGFNEAQLSEIR 654
Query: 183 RVSLARLICDNTDMKQLQRDVF 248
LA +IC N D++++QR+VF
Sbjct: 655 NTKLAEIICSNIDIRRIQRNVF 676
Score = 71.3 bits (167), Expect = 8e-13
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+DL G+++E+ L G+LLG T + + EQ R + DR++Y + N A F+ QL E+R
Sbjct: 1311 DVDLFPGLVSERPLRGALLGTTMSCIIAEQFGRLKKCDRFYYENDNSAAKFTPGQLNEIR 1370
Query: 183 RVSLARLICDNTD-MKQLQRDVFE 251
+V LA + C N+ +K +Q +VF+
Sbjct: 1371 KVKLASIFCSNSKYLKTIQPNVFD 1394
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 80.2 bits (189), Expect = 2e-15
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
DIDL G+++EK +PG ++GPTA + EQ R + DR++Y + + FS QL E+R
Sbjct: 1120 DIDLFTGIVSEKTIPGGIVGPTAACIIAEQFRRLKKCDRFYYENGEDHSKFSASQLKEVR 1179
Query: 183 RVSLARLICDNTDMKQLQRDVF 248
+ S++ LIC NT + ++ +DVF
Sbjct: 1180 KTSMSALICANTKVPKISKDVF 1201
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/83 (31%), Positives = 50/83 (60%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+DL++ +AE + GSLLGPT + Q +T+ D Y+Y++ ++ QL E++
Sbjct: 444 DVDLILLGIAENPVYGSLLGPTFGCIMALQFQKTKFGDTYWYTN-----KLTEDQLEEVK 498
Query: 183 RVSLARLICDNTDMKQLQRDVFE 251
+ S++ ++C + +Q+DVF+
Sbjct: 499 KTSISAMMCRHQKTSIIQKDVFK 521
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/73 (43%), Positives = 50/73 (68%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
DID+ VG ++E+ GSLLGPT LF Q+ +T+ DR++Y + +F+ Q+ E+R
Sbjct: 537 DIDVFVGGLSEQPTKGSLLGPTFACLFAHQMAQTKRGDRFWYENFVSPSAFTVDQIDEIR 596
Query: 183 RVSLARLICDNTD 221
+ ++AR+ICDNTD
Sbjct: 597 KTTMARIICDNTD 609
Score = 70.9 bits (166), Expect = 1e-12
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
DIDL G+M+E GSL+GPT L EQ+ R + DR++Y + F+ QL E+R
Sbjct: 1253 DIDLFPGIMSESPTRGSLVGPTLACLIGEQMQRLKKCDRFYYETSDSMVRFTPDQLVEIR 1312
Query: 183 RVSLARLICDNTD-MKQLQRDVF 248
+ SL+R+ICDN++ +Q +VF
Sbjct: 1313 KASLSRIICDNSEYAANIQPNVF 1335
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 68.1 bits (159), Expect = 8e-12
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNE-AGSFSKRQLAEL 179
DIDL VG+M E+ L G LGPTA+ + EQ + DR+FY + E +F++ +++EL
Sbjct: 612 DIDLYVGIMLEEPLSGGQLGPTASFMIGEQFRALKRGDRFFYESIAEGTDNFTQEEISEL 671
Query: 180 R-RVSLARLICDNTDM-KQLQRDVFE 251
R + SLA++IC N D ++ D+F+
Sbjct: 672 RNKTSLAKIICTNMDFAARINTDIFD 697
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical
protein F32A5.2b protein.
Length = 859
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 IDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELRR 185
IDL VG + E + L+GPT + Q RTR DR++Y + G FS+RQL E+R+
Sbjct: 759 IDLWVGALLEDPIIRGLVGPTVACIIGPQFKRTRDGDRFYYEN---PGVFSRRQLVEIRK 815
Query: 186 VSLARLICDNTD-MKQLQRDVF 248
SL+R+ICDNT+ + + R+ F
Sbjct: 816 SSLSRIICDNTNTISTIPREAF 837
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical protein
F32A5.2a protein.
Length = 1000
Score = 66.9 bits (156), Expect = 2e-11
Identities = 35/82 (42%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +3
Query: 6 IDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELRR 185
IDL VG + E + L+GPT + Q RTR DR++Y + G FS+RQL E+R+
Sbjct: 900 IDLWVGALLEDPIIRGLVGPTVACIIGPQFKRTRDGDRFYYEN---PGVFSRRQLVEIRK 956
Query: 186 VSLARLICDNTD-MKQLQRDVF 248
SL+R+ICDNT+ + + R+ F
Sbjct: 957 SSLSRIICDNTNTISTIPREAF 978
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 65.7 bits (153), Expect = 4e-11
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
+IDL VG + E+ L L GPT + EQ + R DR++Y + G F+ QL E++
Sbjct: 1109 NIDLWVGGIVEEKLENGLFGPTFACIIGEQFRKIRDGDRFWY---EKDGVFTPEQLREIK 1165
Query: 183 RVSLARLICDNTD-MKQLQRDVF 248
+++LARL CDN D + ++Q+DVF
Sbjct: 1166 KITLARLFCDNGDNIDRIQKDVF 1188
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 65.3 bits (152), Expect = 6e-11
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
+IDL VG + EK +L+GPT + +Q R R DR++Y NE FSK QL +++
Sbjct: 1144 NIDLWVGGVTEKRTADALMGPTLACIIADQFKRLRDGDRFWYE--NEE-MFSKAQLRQIK 1200
Query: 183 RVSLARLICDN-TDMKQLQRDVF 248
+V+L+++IC N D+ ++QRD+F
Sbjct: 1201 KVTLSKIICTNGDDIDRIQRDIF 1223
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 65.3 bits (152), Expect = 6e-11
Identities = 34/83 (40%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
+IDL VG + EK +L+GPT + +Q R R DR++Y NE FSK QL +++
Sbjct: 1144 NIDLWVGGVTEKRTADALMGPTLACIIADQFKRLRDGDRFWYE--NEE-MFSKAQLRQIK 1200
Query: 183 RVSLARLICDN-TDMKQLQRDVF 248
+V+L+++IC N D+ ++QRD+F
Sbjct: 1201 KVTLSKIICTNGDDIDRIQRDIF 1223
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 62.1 bits (144), Expect = 5e-10
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSH-VNEAGSFSKRQLAEL 179
DIDL G++ E L G LGPTA+ + EQ + DR++Y + V F+ Q+ +
Sbjct: 669 DIDLYTGLVMETPLAGGQLGPTASWIIAEQFRALKTGDRFYYENGVANTVGFTPTQIDAI 728
Query: 180 RRVSLARLICDNTD-MKQLQRDVFE 251
RRV LA++ C+NT + + D+F+
Sbjct: 729 RRVKLAKIFCENTAIITSINTDIFD 753
>U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical
protein ZK430.8 protein.
Length = 724
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+D VG M E + G L+G T + EQ R R DR+++ + G F++ Q+ E++
Sbjct: 621 DVDFYVGSMLEDPVIGGLVGTTLSCAIGEQFKRARDGDRFYFEN---PGIFTRSQMEEIK 677
Query: 183 RVSLARLICDNTDMKQL-QRDVF 248
+ SL+R+ICDN D +L +D F
Sbjct: 678 KSSLSRIICDNADNFELVSQDAF 700
>Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical
protein F49E12.1 protein.
Length = 655
Score = 54.0 bits (124), Expect = 1e-07
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELR 182
D+D VG + E+ GSLLG T + +Q R R DR++Y + G F+ QLAEL+
Sbjct: 552 DLDFYVGGILEQPAAGSLLGATFACVIGKQFERLRDGDRFYYEN---PGVFTSPQLAELK 608
Query: 183 RVSLARLICDNTD-MKQLQRDVFE 251
R +L+ ++C D M ++ R F+
Sbjct: 609 RTTLSWVLCQTGDNMVRVGRRAFD 632
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 52.4 bits (120), Expect = 4e-07
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +3
Query: 6 IDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNEAGSFSKRQLAELRR 185
ID+ VG + E + +L+GPT + + EQ RTR DR +Y + + FS QL ++++
Sbjct: 621 IDMYVGSLLEDPVKDALVGPTLSCIIGEQFKRTRNGDRLWYEN---SKVFSPEQLLQIKK 677
Query: 186 VSLARLICD 212
++++R++CD
Sbjct: 678 ITMSRVLCD 686
>AF016448-10|ABR92607.1| 849|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform b protein.
Length = 849
Score = 33.1 bits (72), Expect = 0.27
Identities = 31/121 (25%), Positives = 55/121 (45%)
Frame = -3
Query: 795 PNQENLSNYDVSFHNW*LFPWKAPRILNILTSRPGNAPFSEAQNLVSGHHIHLDITATLQ 616
P EN+S ++ ++ + + IL +LT + FS Q VS ++ + L+
Sbjct: 421 PILENVSGGNIKKDDY-MIANRQSVILRLLTFCVEHHSFSMRQRCVSNDLMN-KVLVLLK 478
Query: 615 HGIVNTTRSAAFVVKPILMVIEDKMIKYIMSFLKTINSQERFVRSNSNEYNTETQSCVHN 436
SA +++ ++ V +DK I+YI+ K ++ R N N YN S +H
Sbjct: 479 SKHSFLVLSALKLLQRVVTVKDDKYIRYIVKE-KVLDPVMECFRKNGNRYNIINSSVLHL 537
Query: 435 F 433
F
Sbjct: 538 F 538
>AF016448-7|ABR92606.1| 1085|Caenorhabditis elegans Smek
(dictyostelium suppressorof mek null) homolog protein 1,
isoform a protein.
Length = 1085
Score = 33.1 bits (72), Expect = 0.27
Identities = 31/121 (25%), Positives = 55/121 (45%)
Frame = -3
Query: 795 PNQENLSNYDVSFHNW*LFPWKAPRILNILTSRPGNAPFSEAQNLVSGHHIHLDITATLQ 616
P EN+S ++ ++ + + IL +LT + FS Q VS ++ + L+
Sbjct: 657 PILENVSGGNIKKDDY-MIANRQSVILRLLTFCVEHHSFSMRQRCVSNDLMN-KVLVLLK 714
Query: 615 HGIVNTTRSAAFVVKPILMVIEDKMIKYIMSFLKTINSQERFVRSNSNEYNTETQSCVHN 436
SA +++ ++ V +DK I+YI+ K ++ R N N YN S +H
Sbjct: 715 SKHSFLVLSALKLLQRVVTVKDDKYIRYIVKE-KVLDPVMECFRKNGNRYNIINSSVLHL 773
Query: 435 F 433
F
Sbjct: 774 F 774
>Z22181-13|CAA80184.3| 632|Caenorhabditis elegans Hypothetical
protein ZK632.7 protein.
Length = 632
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 885 FGRLELEVNFHLINPHSQINGPPLTTPGHNPN 790
F +L + H + P QINGPP PG + N
Sbjct: 77 FAQLSIHDVPHQMIPFGQINGPPTFGPGQHMN 108
>U39645-5|AAU05591.1| 345|Caenorhabditis elegans Hypothetical
protein C14F11.4a protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 705 TSRPGNAPFSEA-QNLVSGHHIHLDITATLQHGIVN 601
TS P AP E QNLV H+ H D+ A Q +N
Sbjct: 34 TSYPPRAPKPERPQNLVVSHNYHSDVEAEYQLSKIN 69
>U39645-4|AAU05592.1| 341|Caenorhabditis elegans Hypothetical
protein C14F11.4b protein.
Length = 341
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 705 TSRPGNAPFSEA-QNLVSGHHIHLDITATLQHGIVN 601
TS P AP E QNLV H+ H D+ A Q +N
Sbjct: 34 TSYPPRAPKPERPQNLVVSHNYHSDVEAEYQLSKIN 69
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -2
Query: 352 ASEDVGSLHRVLPRF*VNLL-YFLARHDRVAIRSVSNTSLCSCFISVLSQINLASETLRS 176
+SE + + + F VN+L ++ +RH ++ CSC ++++ + L SE + +
Sbjct: 486 SSERIANFPEFVDLFSVNILRFYWSRHGYRTHKNSQPCGYCSCEVTIVRRPKLYSENIGN 545
Query: 175 SASCRLEKL 149
R L
Sbjct: 546 IGKARKNSL 554
>U50135-2|AAM98043.1| 1584|Caenorhabditis elegans Uncoordinated
protein 104, isoforma protein.
Length = 1584
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 834 QINGPPLTTPGHNPNQENLS-NYDVSF 757
Q+NG T GH+ N+EN S N+D S+
Sbjct: 27 QVNGNTTTINGHSINKENFSFNFDHSY 53
>U50135-1|AAM98044.2| 1628|Caenorhabditis elegans Uncoordinated
protein 104, isoformb protein.
Length = 1628
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 834 QINGPPLTTPGHNPNQENLS-NYDVSF 757
Q+NG T GH+ N+EN S N+D S+
Sbjct: 27 QVNGNTTTINGHSINKENFSFNFDHSY 53
>M58582-1|AAA03517.1| 1584|Caenorhabditis elegans kinesin-related
protein protein.
Length = 1584
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/27 (48%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -3
Query: 834 QINGPPLTTPGHNPNQENLS-NYDVSF 757
Q+NG T GH+ N+EN S N+D S+
Sbjct: 27 QVNGNTTTINGHSINKENFSFNFDHSY 53
>AF000191-3|AAB52882.1| 522|Caenorhabditis elegans Mediator protein
1.2 protein.
Length = 522
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 721 NIEHIDIETRKRPVFRGPKSRKWTSY 644
NIEHID E R V + +WTS+
Sbjct: 23 NIEHIDEEMRLEQVRQAASKMEWTSF 48
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,070,271
Number of Sequences: 27780
Number of extensions: 460819
Number of successful extensions: 1133
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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