Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40036
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 25 1.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 25 1.2
AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier... 23 3.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 4.9
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 4.9
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 4.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 6.5
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 6.5
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 8.6
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 22 8.6
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 22 8.6
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 299 PSLFPRTTRQGCYQKCFEHI 240
P +P ++GCYQ HI
Sbjct: 490 PGKWPHEDKRGCYQLAINHI 509
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 24.6 bits (51), Expect = 1.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -1
Query: 299 PSLFPRTTRQGCYQKCFEHI 240
P +P ++GCYQ HI
Sbjct: 580 PGKWPHEDKRGCYQLAINHI 599
>AY736135-1|AAU84701.1| 253|Apis mellifera take-out-like carrier
protein JHBP-1 protein.
Length = 253
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 834 QINGPPLTTPGHNPNQENLSNYDVSFHN 751
+I G L P + N++ YD+ HN
Sbjct: 132 KIEGKVLLLPVRGAGKSNITMYDLKSHN 159
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.6 bits (46), Expect = 4.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 780 DFPGWGYVRGWSMGV 824
++P W +V GW G+
Sbjct: 523 EYPWWSHVLGWLCGL 537
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.6 bits (46), Expect = 4.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +3
Query: 780 DFPGWGYVRGWSMGV 824
++P W +V GW G+
Sbjct: 576 EYPWWSHVLGWLCGL 590
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 4.9
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 704 VNMFN-IRGAFQGKSYQLWNETS*FERFS 787
+ FN I GA +G YQ +++ +RFS
Sbjct: 17 IGFFNAISGAIKGNDYQRYHQQISGDRFS 45
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 22.2 bits (45), Expect = 6.5
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = +2
Query: 830 IWEWGFIKWKLTSNSNRP 883
+W G + W++ S RP
Sbjct: 821 VWSMGIVCWEVMSYGERP 838
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 6.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 328 GGTRHPRSHQQ 360
GG HP HQQ
Sbjct: 16 GGVEHPHQHQQ 26
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.2 bits (45), Expect = 6.5
Identities = 11/46 (23%), Positives = 19/46 (41%)
Frame = -3
Query: 813 TTPGHNPNQENLSNYDVSFHNW*LFPWKAPRILNILTSRPGNAPFS 676
T P L++ + +W WK P ++ +L P PF+
Sbjct: 841 TNPKEQAQLNLLASDPAVYEDW--RHWKFPNLVEVLDEFPSVRPFA 884
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.8 bits (44), Expect = 8.6
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 801 HNPNQENLSNYDVSFHNW 748
HN N N +NY+ +++N+
Sbjct: 324 HNNNNYNNNNYNNNYNNY 341
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 21.8 bits (44), Expect = 8.6
Identities = 11/56 (19%), Positives = 26/56 (46%)
Frame = -3
Query: 393 FSPMITLSLIHLLVRARMSGPSTESCHASKLTFFISSHDTTGLLSEVFRTHLSAVV 226
++ + TL I ++R + ++C T +++ TG SE+ + + +V
Sbjct: 178 YTKISTLDAILDIIRNMVPENLVQACFQQAQTTYVTKEVATGTASEITQIQEATLV 233
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 846 NPHSQINGPPLTTPGHNPNQENLSNYDVSFHNW*LFP 736
+P S GP L PG PN E+ S V + P
Sbjct: 41 DPRSN-RGPVLFPPGPPPNNEDSSGVIVGASGYGFVP 76
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 259,065
Number of Sequences: 438
Number of extensions: 5496
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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