Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40036
(890 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ... 40 0.002
At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase, ... 33 0.25
At5g60690.1 68418.m07616 homeodomain-leucine zipper protein Revo... 29 4.1
At5g13500.3 68418.m01559 expressed protein predicted protein At2... 29 4.1
At5g13500.2 68418.m01558 expressed protein predicted protein At2... 29 4.1
At5g13500.1 68418.m01557 expressed protein predicted protein At2... 29 4.1
At3g59750.1 68416.m06666 receptor lectin kinase, putative simila... 28 7.2
At2g05850.1 68415.m00634 serine carboxypeptidase S10 family prot... 28 7.2
At1g18460.1 68414.m02303 lipase family protein similar to triacy... 28 7.2
At4g21180.1 68417.m03063 DNAJ heat shock N-terminal domain-conta... 28 9.6
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 28 9.6
>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 639
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 3 DIDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNE 143
++DL+VG+MAEK + G + TA +F R ADR+F S NE
Sbjct: 533 ELDLLVGLMAEKKIKGFAISETAFYIFLIMATRRLEADRFFTSDFNE 579
>At1g73680.1 68414.m08532 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 631
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +3
Query: 6 IDLVVGMMAEKHLPGSLLGPTATSLFKEQLWRTRIADRYFYSHVNE 143
+DL VG+ AEK + G + TA +F R ADR+F ++ NE
Sbjct: 526 LDLNVGLHAEKKIKGFAISETAFFIFLLVASRRLEADRFFTTNFNE 571
>At5g60690.1 68418.m07616 homeodomain-leucine zipper protein
Revoluta (REV) / fascicular fiberless 1 (IFL1) identical
to HD-zip transcription factor Revoluta (GI:9759333)
{Arabidopsis thaliana}; contains Pfam profiles PF01852:
START domain and PF00046: Homeobox domain
Length = 842
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/45 (31%), Positives = 27/45 (60%)
Frame = -3
Query: 744 LFPWKAPRILNILTSRPGNAPFSEAQNLVSGHHIHLDITATLQHG 610
+FP AP + + P +A + Q+L++ +H LD+T++L+ G
Sbjct: 570 MFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHRTLDLTSSLEVG 614
>At5g13500.3 68418.m01559 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 AVISKWI*CPLTRFWASENGAFPGLDVNMFNIRGAFQGKSYQLWNETS*FERFSWLGLCP 805
A +KW C + +W + A PG D+ F R G S L +E F L P
Sbjct: 72 APYNKWQ-CRIMYYWYKQKKALPGSDMGGFT-RILHSGNSDNLMDE---IPTFVVDPLPP 126
Query: 806 GVVNGGPLI-WEWGFIKW 856
G+ G ++ W F++W
Sbjct: 127 GLDRGYVVLNRPWAFVQW 144
>At5g13500.2 68418.m01558 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 AVISKWI*CPLTRFWASENGAFPGLDVNMFNIRGAFQGKSYQLWNETS*FERFSWLGLCP 805
A +KW C + +W + A PG D+ F R G S L +E F L P
Sbjct: 72 APYNKWQ-CRIMYYWYKQKKALPGSDMGGFT-RILHSGNSDNLMDE---IPTFVVDPLPP 126
Query: 806 GVVNGGPLI-WEWGFIKW 856
G+ G ++ W F++W
Sbjct: 127 GLDRGYVVLNRPWAFVQW 144
>At5g13500.1 68418.m01557 expressed protein predicted protein
At2g25260 - Arabidopsis thaliana, EMBL:AC007070
Length = 358
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 626 AVISKWI*CPLTRFWASENGAFPGLDVNMFNIRGAFQGKSYQLWNETS*FERFSWLGLCP 805
A +KW C + +W + A PG D+ F R G S L +E F L P
Sbjct: 72 APYNKWQ-CRIMYYWYKQKKALPGSDMGGFT-RILHSGNSDNLMDE---IPTFVVDPLPP 126
Query: 806 GVVNGGPLI-WEWGFIKW 856
G+ G ++ W F++W
Sbjct: 127 GLDRGYVVLNRPWAFVQW 144
>At3g59750.1 68416.m06666 receptor lectin kinase, putative similar
to receptor lectin kinase 3 [Arabidopsis thaliana]
gi|4100060|gb|AAD00733
Length = 626
Score = 28.3 bits (60), Expect = 7.2
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = -1
Query: 473 TNTILKHSLVFTIFNDDQLPVKKSRFCFH 387
TNT KHS T FN++ +P+K S F FH
Sbjct: 46 TNT-KKHSCGQT-FNNESIPIKDSSFSFH 72
>At2g05850.1 68415.m00634 serine carboxypeptidase S10 family protein
similar to SP|P52711 Serine carboxypeptidase II-3
precursor (EC 3.4.16.6) Hordeum vulgare; contains Pfam
profile PF0450 serine carboxypeptidase
Length = 487
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/71 (23%), Positives = 35/71 (49%)
Frame = -3
Query: 651 HHIHLDITATLQHGIVNTTRSAAFVVKPILMVIEDKMIKYIMSFLKTINSQERFVRSNSN 472
H+ HLD+ +N+T S+ +M ++ Y+ ++L + N QE + +N+
Sbjct: 301 HNKHLDVYNIYAPVCLNSTLSSEPKKCTTIMEVDPCRSNYVKAYLNSENVQEA-MHANTT 359
Query: 471 EYNTETQSCVH 439
+ E ++C H
Sbjct: 360 KLPYEWKACNH 370
>At1g18460.1 68414.m02303 lipase family protein similar to
triacylglycerol lipase, gastric precursor (EC 3.1.1.3)
{Canis familiaris} [SP|P80035]
Length = 701
Score = 28.3 bits (60), Expect = 7.2
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -2
Query: 661 RKWTSYPLGYHSHFTTW 611
R W S P Y SH+T W
Sbjct: 118 RSWASLPANYESHWTDW 134
>At4g21180.1 68417.m03063 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 661
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -2
Query: 283 ARHDRVAIRSVSNTSLCSCFISVLSQINLASETLRSSASCRLEKLPAS 140
A + +++R + SL F+SV S++NL + L+ + +K PA+
Sbjct: 253 AEYAEISVRKSDDESLQKLFMSVKSELNLDPKKLKQEEAKFWKKHPAT 300
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = -3
Query: 642 HLDITATLQHGIVNTTRSAAFVVKPILMVIEDKMIKYIMSFLKTINSQERFVRSNS 475
H+D+ A + GIV T AF + D + ++S L+ I + +R+VRS +
Sbjct: 87 HIDLAACKRRGIVITNAGNAFSDD-----VADCAVGLLISVLRRIPAADRYVRSGN 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,886,172
Number of Sequences: 28952
Number of extensions: 427114
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1184
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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