Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40035
(890 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 101 1e-21
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 100 1e-21
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 100 1e-21
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 35 0.100
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 33 0.30
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 32 0.53
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 31 0.93
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 30 2.1
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 3.8
06_01_0080 + 644021-645463 29 3.8
11_01_0642 + 5167229-5167310,5168203-5168336,5169627-5169676,517... 29 5.0
06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-72... 29 6.6
12_02_0704 - 22293955-22294255,22294276-22294602,22294794-222948... 28 8.7
12_02_0142 - 14306325-14306490,14306584-14306687,14306788-143069... 28 8.7
03_04_0243 + 19298293-19299117 28 8.7
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 101 bits (241), Expect = 1e-21
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 402
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKEFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 403 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 72.9 bits (171), Expect = 3e-13
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 71 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 250
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 251 KASK 262
+ K
Sbjct: 64 RCIK 67
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG F+ + LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDL 209
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 100 bits (240), Expect = 1e-21
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 402
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 403 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 72.9 bits (171), Expect = 3e-13
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 71 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 250
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 251 KASK 262
+ K
Sbjct: 64 RCIK 67
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG F+ + LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDL 209
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 100 bits (240), Expect = 1e-21
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
Frame = +1
Query: 229 GKKHNDAQSIKDHLDN--NPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARP 402
GK + IK H DN N +L+P + GNVG +FT+GDL EVR+++ + KV APAR
Sbjct: 57 GKNTLIRRCIKVHADNTGNKDFLELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARV 116
Query: 403 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISR 510
G +AP+ VV+P NTGL P +TSFFQ L+IPTKI++
Sbjct: 117 GLVAPVDVVVPPGNTGLDPSQTSFFQVLNIPTKINK 152
Score = 72.9 bits (171), Expect = 3e-13
Identities = 37/64 (57%), Positives = 44/64 (68%)
Frame = +2
Query: 71 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSSIVLMGKNTMMR 250
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 251 KASK 262
+ K
Sbjct: 64 RCIK 67
Score = 72.9 bits (171), Expect = 3e-13
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +3
Query: 507 KGTIEIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDI 680
KGT+EII V ++K GDKVG+SE+ LL L I PFSYGLV+ VYDSG F+ + LD+
Sbjct: 152 KGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDL 209
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 34.7 bits (76), Expect = 0.100
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Frame = +1
Query: 253 SIKDHLDNNPALEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 423
S+ L N AL+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 391 SVPRTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLS 450
Query: 424 V----VIPAHN--TGLGPEKTSFFQALSI 492
I HN G PEK S +L +
Sbjct: 451 ARLISFIADHNKLAGSLPEKMSNLSSLEL 479
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 33.1 bits (72), Expect = 0.30
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 29 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLR 208
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 209 GSS-IVLMGKNTM 244
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 32.3 bits (70), Expect = 0.53
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +2
Query: 41 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRFSLRGSS- 217
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 218 IVLMGKNTM 244
I L GK M
Sbjct: 203 IFLAGKKVM 211
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Frame = +1
Query: 280 PALEK-LLPHIKGN---VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 438
PAL+K L H K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 131 PALDKDALWHFKPEKLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/64 (26%), Positives = 37/64 (57%)
Frame = +3
Query: 519 EIINDVHILKPGDKVGASEANLLNMLNISPFSYGLVVKQVYDSGIFFALKFLDIQTRRFS 698
E++ +++P D VG S ++++ +++ P+S VV+ +Y+S A K + + R+
Sbjct: 346 EMLPSGFLIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQK-ISMAALRYL 403
Query: 699 CQVS 710
QV+
Sbjct: 404 RQVA 407
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 233 KNTMMRKASKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWRTKSKLQLVLVPL 412
K+ MM ++W +QP +R L S + LR+V WR+ ++LQ + PL
Sbjct: 392 KSCMMAAVQSSSWADLQPELLGLVLTR--LPSLAD-RVRLRAVCRPWRSNARLQPLPPPL 448
Query: 413 P 415
P
Sbjct: 449 P 449
>06_01_0080 + 644021-645463
Length = 480
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 504 NLGRDRKSLEERGLLWTEAGVVGGND 427
N R K++EERGLL+ GV GG +
Sbjct: 110 NTERREKAMEERGLLYLGMGVSGGEE 135
>11_01_0642 +
5167229-5167310,5168203-5168336,5169627-5169676,
5170786-5170816,5172298-5172489,5172490-5172612,
5173002-5173172
Length = 260
Score = 29.1 bits (62), Expect = 5.0
Identities = 28/90 (31%), Positives = 37/90 (41%)
Frame = -1
Query: 818 KGSLKPIGKWEIRA*SN*LVTKLAKRKEQLHKQLQLGNLARKSSGLNVQEFQCKKYSRII 639
KG+ P G IR + V +L + EQ HK L + E C KY +
Sbjct: 10 KGTQTPGGGPSIRDAIDDGVVRLVLKNEQFHKYLTISKDLTMIL-YEQWEHPCVKYILKL 68
Query: 638 YLLNNKTI*EWRDVQHVEKVGFRSSNFVTG 549
TI R +Q + +GFRS FV G
Sbjct: 69 AGKFASTIGRARRLQPIVSLGFRSIAFVFG 98
>06_01_0090 - 724296-724532,724756-724938,725038-725088,725520-725639,
725738-725840,726106-726264,726728-726846,726891-727004,
727119-727277,727404-727451,728464-728640,729064-729116,
729549-729661,729793-729873,729966-730081,730786-730905,
732321-732429,732593-732770,732852-732920,733102-733233,
733657-733766,733843-734003,734081-734171,734258-734355,
734499-734619,734732-734892,734985-735090,735142-735236,
735828-735852,736008-736084,736196-736282,736372-736421,
736558-736639,736735-736795,737064-737116,737206-737395,
737472-737595,737860-737962,738064-738156,740344-740422,
740508-740584,740915-741043,742614-742731,742816-742913,
743457-743546,744998-745123,745238-745351,745488-745611,
745865-746019,746104-746201,746357-746600
Length = 1926
Score = 28.7 bits (61), Expect = 6.6
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +1
Query: 172 LATDAADPFLATWLQYRAHGKKHNDAQSIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLV 351
+++D + + ++ HGK + SIK L NP L + P + N +FTRGD +
Sbjct: 1254 VSSDGRKEYYSKLVKADVHGKDQ-EIYSIK--LPGNPKLGEGKPENQ-NHAIIFTRGDAI 1309
Query: 352 EVRDKLLENKVQ 387
+ D +N ++
Sbjct: 1310 QTIDMNQDNYLE 1321
>12_02_0704 -
22293955-22294255,22294276-22294602,22294794-22294840,
22297252-22297316,22297439-22297541
Length = 280
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 755 KLAKRKEQLHKQLQLGNLARKSSGLNVQEFQCKKYSRII 639
K+ KE++ K L +L+ S N + CKKY II
Sbjct: 201 KVVTDKEKIEKTLSTFHLSAMHSTRNHRRMTCKKYDEII 239
>12_02_0142 -
14306325-14306490,14306584-14306687,14306788-14306967,
14307155-14307253,14307346-14307535,14307722-14307748,
14308190-14308506,14308532-14308675,14308799-14308905,
14309085-14309357,14309470-14309827
Length = 654
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -2
Query: 667 FSAKNIPESYTCLTTRPYENGEMFNMLRRLASEAPTLSPGFKMCTSLMI 521
FSA+ + E + CL +P G + L ++ SEA + P F++ +++I
Sbjct: 75 FSARGLVEEFVCLGIQPLTAGWNIS-LGQMLSEATSTLPPFEVDLNIVI 122
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 431 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 288
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,191,113
Number of Sequences: 37544
Number of extensions: 627355
Number of successful extensions: 1781
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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