Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40034
         (894 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011706-1|AAH11706.1|  216|Homo sapiens asparagine-linked glyco...    85   2e-16
AY032980-1|AAL62340.1|  242|Homo sapiens Angrgm-52 protein.            30   9.9  

>BC011706-1|AAH11706.1|  216|Homo sapiens asparagine-linked
           glycosylation 14 homolog (S. cerevisiae) protein.
          Length = 216

 Score = 85.4 bits (202), Expect = 2e-16
 Identities = 41/93 (44%), Positives = 65/93 (69%), Gaps = 9/93 (9%)
 Frame = +3

Query: 255 ILADNDINSESKI--FEAE-------NKQSTYLLNKIPRSRKVNQSYFSSVFSTIYSTLI 407
           ++AD D  S +KI  FE +       N  + Y +++IPRSR+V QS+ S+VF+T++S  +
Sbjct: 69  VIADTDEMSANKINSFELDRADRDPSNMYTKYYIHRIPRSREVQQSWPSTVFTTLHSMWL 128

Query: 408 TVPVIYKFKPNVIFCNGPGTCIPICVVAFILRI 506
           + P+I++ KP+++ CNGPGTC+PICV A +L I
Sbjct: 129 SFPLIHRVKPDLVLCNGPGTCVPICVSALLLGI 161



 Score = 44.0 bits (99), Expect = 7e-04
 Identities = 18/36 (50%), Positives = 28/36 (77%)
 Frame = +2

Query: 527 IVFIESICRVRSLSLTGKILQYFADLVVVHGPQLRD 634
           IV++ESICRV +LS++GKIL + +D  +V  P L++
Sbjct: 169 IVYVESICRVETLSMSGKILFHLSDYFIVQWPALKE 204



 Score = 39.1 bits (87), Expect = 0.021
 Identities = 21/66 (31%), Positives = 34/66 (51%)
 Frame = +1

Query: 52  LCLIFTALVIGVIARVIYLLIKIFTTECALYQDSNLRSIFCIGSGGHTTELLRFMRNLNC 231
           +C++  A   G +A  + L I +      +    +L  +   GSGGHTTE+LR + +L+ 
Sbjct: 2   VCVLVLAAAAGAVAVFLILRIWVVLRSMDVTPRESLSILVVAGSGGHTTEILRLLGSLS- 60

Query: 232 RKYYPR 249
             Y PR
Sbjct: 61  NAYSPR 66


>AY032980-1|AAL62340.1|  242|Homo sapiens Angrgm-52 protein.
          Length = 242

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +2

Query: 548 CRVRSLSLTGKILQYFADLVVVHGPQLRD 634
           C+V + +L  K+ QYF+++ +V GP LRD
Sbjct: 190 CQVVANTLGLKLNQYFSEISLVFGPNLRD 218


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,475,223
Number of Sequences: 237096
Number of extensions: 3022789
Number of successful extensions: 5812
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5811
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)