Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40031
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 28 3.1
AF078781-4|AAC26918.1| 255|Caenorhabditis elegans Hypothetical ... 28 3.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 28 4.1
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 28 4.1
AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying de... 28 4.1
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 28 4.1
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 28 4.1
Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical p... 27 7.2
U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical pr... 27 7.2
AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2 ... 27 7.2
Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical pr... 27 9.5
U00034-2|AAM15548.1| 378|Caenorhabditis elegans Pim (mammalian ... 27 9.5
U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian ... 27 9.5
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.3 bits (60), Expect = 3.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = -3
Query: 218 LSIFTGTYYFYRVFTQAVFIQTLLNQDFQFFSHLRGETD 102
+ IF T+ FY+ + +F++ LL +QF ++ ++D
Sbjct: 2609 IDIFDKTHLFYQNGSSLIFLKPLLPGTYQFSLQIKSQSD 2647
>AF078781-4|AAC26918.1| 255|Caenorhabditis elegans Hypothetical
protein B0545.4 protein.
Length = 255
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 177 EDAIEVIRAGEYREDEPFQNLVYCAYRNSERSMKIIESSVKLQ 305
++ +E IRA E +DEP+ N V Y + S ++ E K+Q
Sbjct: 68 DEVLEFIRAVEKEDDEPYSN-VDSEYDDFGDSSEVTEPVAKIQ 109
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 129 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 251
K + ++Q+CLN+ GLG D R + F+N C+
Sbjct: 174 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 214
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 129 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 251
K + ++Q+CLN+ GLG D R + F+N C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216
>AF068714-7|AAT68905.1| 592|Caenorhabditis elegans Egg laying
defective protein 8,isoform c protein.
Length = 592
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 129 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 251
K + ++Q+CLN+ GLG D R + F+N C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 129 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 251
K + ++Q+CLN+ GLG D R + F+N C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 129 KLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYCA 251
K + ++Q+CLN+ GLG D R + F+N C+
Sbjct: 176 KPEKMVQKCLNDLGLGGDKYTPARVINRSMGKKFRNFYKCS 216
>Z68882-11|CAA93104.1| 520|Caenorhabditis elegans Hypothetical
protein C47E12.8 protein.
Length = 520
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 SRKLVSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEY--REDEPFQNLVYCA 251
S + S+ PE+AK+++++ E G+ + AG + R++E +Q ++ CA
Sbjct: 124 SMAITSWGPEIAKEMEIVTGA---EYGINSFKFFLAYAGVFMVRDEEFYQGMIQCA 176
>U41544-1|AAA83183.2| 2275|Caenorhabditis elegans Hypothetical protein
M03A8.2 protein.
Length = 2275
Score = 27.1 bits (57), Expect = 7.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Frame = +3
Query: 117 EVAKKLKVLIQECLNEN------GLGEDAIEVIRAGEYRED--EPFQNLVYCAYRN 260
+V K+++ +IQE +NEN +GEDA+ + + D E ++ + A RN
Sbjct: 1346 DVEKRIQAMIQEAVNENDERDGIAIGEDAVREFATIQPKHDANETNESFEHVASRN 1401
>AB040993-1|BAB21561.1| 520|Caenorhabditis elegans CeCRMP/DHP-2
protein.
Length = 520
Score = 27.1 bits (57), Expect = 7.2
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 SRKLVSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEY--REDEPFQNLVYCA 251
S + S+ PE+AK+++++ E G+ + AG + R++E +Q ++ CA
Sbjct: 124 SMAITSWGPEIAKEMEIVTGA---EYGINSFKFFLAYAGVFMVRDEEFYQGMIQCA 176
>Z54236-4|CAA90984.1| 1274|Caenorhabditis elegans Hypothetical protein
C27B7.4 protein.
Length = 1274
Score = 26.6 bits (56), Expect = 9.5
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 189 LSRLHPSRFHSNTPESGLSIF*PPP 115
LS L S F++N P S + + PPP
Sbjct: 1035 LSGLSSSNFYNNAPGSSMGMMGPPP 1059
>U00034-2|AAM15548.1| 378|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform c protein.
Length = 378
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 102 VSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEYRE-DEPF 230
V F P+++K++ L++ CL + ++ I A + E D+PF
Sbjct: 249 VKFPPDLSKEVCQLVKSCLTTSTSARASLAQIAAHPWMETDKPF 292
>U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform a protein.
Length = 566
Score = 26.6 bits (56), Expect = 9.5
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +3
Query: 102 VSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEYRE-DEPF 230
V F P+++K++ L++ CL + ++ I A + E D+PF
Sbjct: 249 VKFPPDLSKEVCQLVKSCLTTSTSARASLAQIAAHPWMETDKPF 292
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,027,807
Number of Sequences: 27780
Number of extensions: 230025
Number of successful extensions: 602
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 602
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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