Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40031
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              32   0.003
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    29   0.020
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.3  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    23   1.7  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    23   2.3  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.0  

>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 251 LQKFGALDENN-----RIISQVAAASFPKDIDVVTVIESCGKEDGNTPVDQVFKYFKCFQ 415
           L+KF  +D+ N      ++ +V   +F K+I V  +I+SC   D +   ++ F + KC  
Sbjct: 76  LEKFNVMDKKNGKIRYNLLKKVIPEAF-KEIGV-EMIDSCSNVDSSDKCEKSFMFMKCMY 133

Query: 416 KNSPV 430
           + +P+
Sbjct: 134 EVNPI 138



 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 147 QECLNENGLGEDAIEVIRAGEYREDEPFQNLVYC 248
           ++C+ E     + +E    GE+ EDE  +    C
Sbjct: 41  KKCIGETKTTIEDVEATEYGEFPEDEKLKCYFNC 74


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 29.5 bits (63), Expect = 0.020
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 111 APEVAKKLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYC 248
           A +V K  K + + CL +  + E+ ++ +R GE+ +D   Q    C
Sbjct: 26  ADQVEKLAKNMRKSCLQKIAITEELVDGMRRGEFPDDHDLQCYTTC 71


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 221 RTIPELSLLRLQKFGALDENNRIISQVAAASFPKDIDVVTVIESCG 358
           ++I E++LLR + +GAL+   R+     A  F K +  +  I S G
Sbjct: 350 KSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIG 395


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +2

Query: 221 RTIPELSLLRLQKFGALDENNRIISQVAAASFPKDIDVVTVIESCG 358
           ++I E++LLR + +GAL+   R+     A  F K +  +  I S G
Sbjct: 350 KSIQEVTLLREKIYGALEGYCRVAWPDDAGRFAKLLLRLPAIRSIG 395


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = +3

Query: 84  EDSRKLVSFAPEVAKKLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYC 248
           ED+        E  K +K L + C  +N   ++ ++    GE+ +DE     + C
Sbjct: 20  EDTMSKKMTIEEAKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMCYMKC 74


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 117 EVAKKLKVLIQECLNENGLGEDAIEVIRAGEYREDEPFQNLVYC 248
           E+ K +K L + C  +N   ++ ++    GE+ +DE     + C
Sbjct: 5   ELKKTIKNLRKVCSKKNDTPKELLDGQFRGEFPQDERLMCYMKC 48


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +1

Query: 364 RWKYPGRSSVQILQVLPEKLA 426
           RW YPG        VL +K+A
Sbjct: 617 RWSYPGEEMGGSSGVLAKKVA 637


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,301
Number of Sequences: 438
Number of extensions: 2835
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)