Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40030
(879 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.8
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 24 1.8
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 24 1.8
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 24 1.8
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 24 1.8
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 24 1.8
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 24 1.8
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 24 1.8
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 24 1.8
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 24 1.8
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 23 4.2
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 4.2
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 4.2
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 22 5.5
AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6 prot... 21 9.7
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 132 YPIQDCFHNDCHTGGG 179
Y QDC+ DC G G
Sbjct: 78 YNTQDCYREDCIPGDG 93
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 67 ASPQDLSTNGAPPRSTP 83
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 826 SAPQDLXTQNTPPQHVP 776
++PQDL T PP+ P
Sbjct: 111 ASPQDLSTNGAPPRSTP 127
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 22.6 bits (46), Expect = 4.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 312 SRSHHKASQNSPMKIPAS 259
SRSH A+++ P PAS
Sbjct: 247 SRSHQPATKSKPRPAPAS 264
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 390 HYMNEQHPENKHQEP 346
H+M EQHP+ H +P
Sbjct: 169 HHMQEQHPQ--HHQP 181
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.6 bits (46), Expect = 4.2
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 390 HYMNEQHPENKHQEP 346
H+M EQHP+ H +P
Sbjct: 171 HHMQEQHPQ--HHQP 183
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 22.2 bits (45), Expect = 5.5
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 632 QLRTFRQLCSLCIP 591
QL F Q C++C+P
Sbjct: 15 QLFRFGQFCAICVP 28
>AY873916-1|AAW67572.1| 377|Tribolium castaneum chitinase 6
protein.
Length = 377
Score = 21.4 bits (43), Expect = 9.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 868 SFKPGGHLKGIISSSAPQD 812
+F+PGG+L + ++ P D
Sbjct: 163 AFRPGGYLLTVAVAAIPTD 181
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,537
Number of Sequences: 336
Number of extensions: 5471
Number of successful extensions: 23
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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