Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40030
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical ... 66 3e-11
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 37 0.022
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 37 0.022
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 32 0.62
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 31 1.1
U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical pr... 31 1.4
U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical pr... 31 1.4
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 30 2.5
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 30 2.5
AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autopha... 30 2.5
AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autopha... 30 2.5
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 30 2.5
U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 4.4
S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA s... 29 4.4
L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA s... 29 4.4
AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin reu... 29 5.8
AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of... 29 5.8
AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore ... 29 5.8
AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore ... 29 5.8
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL032648-5|CAA21698.1| 343|Caenorhabditis elegans Hypothetical
protein Y54G9A.6 protein.
Length = 343
Score = 66.1 bits (154), Expect = 3e-11
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Frame = +3
Query: 261 LLVSSWDCSVRLYDV--TANI-ERHKYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNA 431
L S WD + R+Y+V +I E+ + H P+L F GG+D +K+ D+
Sbjct: 40 LAASGWDGTCRVYEVGKLGDISEKLVFTHGKPLLTCTFAGYNKVAFGGVDHNVKLADIET 99
Query: 432 STETILGEHKGAIRCVEFASELNAVLQEAGMEQS-KCGIAEFQTVSALTIREMNGYTQ*A 608
T LG H A+RC+EF + +++++ G + S K A A+ ++
Sbjct: 100 GNGTQLGSHALAVRCMEF-NPMSSLIVSGGWDSSVKLWDARSYGNGAIESVNVSSSVYAM 158
Query: 609 *LAKSS*LV-HXDVKIFVWDVRNMGHVNQRRDPHSNIQPRCLRVFPHKQGLRISSIRG 779
+ K + LV D KIF++D R + Q RD Q R ++ FP + +SSI G
Sbjct: 159 DVLKHTILVGTKDRKIFMYDSRKLREPLQVRDSPLKYQTRAVQFFPTGEAFVVSSIEG 216
Score = 33.5 bits (73), Expect = 0.20
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +1
Query: 727 AYECFPISRGYVSAPLEGRVAVEYFGXVNPEVPKKKLCLSNAHR 858
A + FP +V + +EGRVAVEY E+ K+K HR
Sbjct: 199 AVQFFPTGEAFVVSSIEGRVAVEYVDQSGEEMMKRKYAF-KCHR 241
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 5/97 (5%)
Frame = +3
Query: 255 QYLLVSSWDCSVRLYDVTANIERHKY-NHELPVLDVCF-RDAVHSYSGGLDQTLKMYDLN 428
Q+ L SWD ++RL+D+ + ++ +H VL V F D SG D+++K+++
Sbjct: 82 QFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTL 141
Query: 429 ASTE-TILGE-HKGAIRCVEFA-SELNAVLQEAGMEQ 530
A + TI + H + V F+ S + V+ AG ++
Sbjct: 142 AQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDK 178
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVV 631
+G +D TVK+W++ C+ T N RVY++ E+ +V
Sbjct: 391 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 431
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVV 631
+G +D TVK+W++ C+ T N RVY++ E+ +V
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVV 631
+G +D TVK+W++ C+ T N RVY++ E+ +V
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIV 433
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/75 (22%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 261 LLVSSWDCSVRLY---DVTANIERHKYNHELPVLDVCF-RDAVHSYSGGLDQTLKMYDLN 428
L SWD ++R++ D + + N P+LD+ + D+ + D+ +++DL
Sbjct: 60 LACGSWDGTIRVWMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLA 119
Query: 429 ASTETILGEHKGAIR 473
++ ++G H G ++
Sbjct: 120 SNQVAVVGTHDGPVK 134
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 500 CSATGSWDGTVKMWDSR-VPNCVGTYN-QGNERVYTMSIVGEKFVVGTSGR 646
C TGS+D T++ WD + +PN Q ERVY ++ VV + +
Sbjct: 146 CLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVVALANK 196
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 31.9 bits (69), Expect = 0.62
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 506 ATGSWDGTVKMWDSRVPNCVGT 571
A+GS+DG V++WDS CV T
Sbjct: 248 ASGSYDGIVRIWDSTTGTCVKT 269
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGT--YNQGNERVYTMSIVGEKFVVG 634
+ S+D T+++W C+GT +N+G +++ G VG
Sbjct: 56 SASYDLTIRLWQLSTGKCIGTIPHNEGQVNALSLTSTGRDLAVG 99
>U80447-3|AAB37807.2| 910|Caenorhabditis elegans Hypothetical
protein F55F8.3 protein.
Length = 910
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQ 580
ATG+ DG VK+W+SR C T+++
Sbjct: 376 ATGAEDGKVKIWNSRSSFCTVTFDE 400
>U41007-1|AAA82264.1| 326|Caenorhabditis elegans Hypothetical
protein C33H5.7 protein.
Length = 326
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 521 DGTVKMWDSRVPNCVGTYNQGNERVYTMSIVGEKFVVG 634
D T+++WD + NC+G N + T G F G
Sbjct: 133 DKTIRLWDLKTHNCIGLMNLSATPIATFDPEGLLFAAG 170
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 506 ATGSWDGTVKMWDSRVPNCVGTY-NQGNERVYTMSIVGEKFVVGTSGRK 649
ATGS DG VK+WD R + T+ N+ + + ++S +G G+K
Sbjct: 396 ATGSEDGEVKLWDLRKLKNLKTFANEEKQPINSLSFDMTGTFLGIGGQK 444
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 336 HELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
H +LDV + S G+D+T+K++ L+ + +H + CV F
Sbjct: 716 HTADILDVSWSKNYFILSSGMDRTVKLWHLSRNECLCCFQHIDFVTCVAF 765
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +3
Query: 336 HELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETILGEHKGAIRCVEF 485
H +LDV + S G+D+T+K++ L+ + +H + CV F
Sbjct: 716 HTADILDVSWSKNYFILSSGMDRTVKLWHLSRNECLCCFQHIDFVTCVAF 765
>AF016448-16|AAM45377.1| 394|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform b protein.
Length = 394
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 336 HELPVLDVCFR--DAVHSYSGGLDQ-TLKMYD-LNASTETILGEHKGAIRCVEFASELNA 503
++L VLD+ +A+ +Y G D ++ ++D +N S+ + H+G I C++F E N
Sbjct: 143 NKLGVLDLTSNPGNALIAYPGSTDTGSVHLFDAINLSSVSTFNAHEGTIACLKFNQEGNM 202
Query: 504 V 506
+
Sbjct: 203 I 203
>AF016448-15|AAB65961.1| 412|Caenorhabditis elegans Atg (autophagy)
related protein18, isoform a protein.
Length = 412
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +3
Query: 336 HELPVLDVCFR--DAVHSYSGGLDQ-TLKMYD-LNASTETILGEHKGAIRCVEFASELNA 503
++L VLD+ +A+ +Y G D ++ ++D +N S+ + H+G I C++F E N
Sbjct: 143 NKLGVLDLTSNPGNALIAYPGSTDTGSVHLFDAINLSSVSTFNAHEGTIACLKFNQEGNM 202
Query: 504 V 506
+
Sbjct: 203 I 203
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGTYN 577
T S D TVK+WD+ + NC+ T N
Sbjct: 69 TASGDLTVKIWDAELGNCLYTIN 91
>U23139-7|AAK31492.1| 929|Caenorhabditis elegans Hypothetical
protein F13H8.2 protein.
Length = 929
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 506 ATGSWDGTVKMWDSRVPNCVGTYNQGNERVYTMSIV-GEKFVVGTS 640
ATG DG + +WD + + E V M V G++F++ TS
Sbjct: 119 ATGGKDGVIVLWDILAERGMFRLHGHKESVTQMKFVRGDRFIISTS 164
>Z69384-2|CAD89746.1| 521|Caenorhabditis elegans Hypothetical
protein T11G6.1b protein.
Length = 521
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 SATGSWDGTVKMWDSR--VPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
+A G +DG VKM+DS+ VP C ++ G ER++ + +K + T+
Sbjct: 378 AAGGRYDGLVKMFDSKANVPCCGVSF--GIERLFAIMEARQKVAIRTT 423
>Z69384-1|CAA93416.1| 520|Caenorhabditis elegans Hypothetical
protein T11G6.1a protein.
Length = 520
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 SATGSWDGTVKMWDSR--VPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
+A G +DG VKM+DS+ VP C ++ G ER++ + +K + T+
Sbjct: 377 AAGGRYDGLVKMFDSKANVPCCGVSF--GIERLFAIMEARQKVAIRTT 422
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 509 TGSWDGTVKMWDSRVPNCVGTYNQGNERVY 598
TGS D TV++W + T N G ERV+
Sbjct: 246 TGSEDSTVRLWHANTYRLETTLNYGLERVW 275
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.1 bits (62), Expect = 4.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 506 ATGSWDGTVKMWDSRVPNCVGT 571
A+GS+DG V++WD+ C+ T
Sbjct: 229 ASGSYDGLVRIWDTANGQCIKT 250
>S68230-1|AAD14008.1| 514|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 514
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 SATGSWDGTVKMWDSR--VPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
+A G +DG VKM+DS+ VP C ++ G ER++ + +K + T+
Sbjct: 327 AAGGRYDGLVKMFDSKANVPCCGVSF--GIERLFAIMEARQKVAIRTT 372
>L13152-1|AAB38116.1| 525|Caenorhabditis elegans histidyl tRNA
synthetase protein.
Length = 525
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = +2
Query: 503 SATGSWDGTVKMWDSR--VPNCVGTYNQGNERVYTMSIVGEKFVVGTS 640
+A G +DG VKM+DS+ VP C ++ G ER++ + +K + T+
Sbjct: 338 AAGGRYDGLVKMFDSKANVPCCGVSF--GIERLFAIMEARQKVAIRTT 383
>AF385631-1|AAK84832.1| 671|Caenorhabditis elegans serotonin
reuptake transporter protein.
Length = 671
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 682 CPMLRTSHTNIFTSXCTNYELFAN--YAHCVYPFISLIVSADTVWNSAIPHFDCSIPASC 509
CP+ R I CT +F N A VY IVS +W+S +P C P +
Sbjct: 176 CPLFRGIGYGI-CCICTFIAIFYNAIIAQAVY---FAIVSLSKIWDSEVPWASCGNPWN- 230
Query: 508 STALSSDANST--QRIAPLCSP 449
+ S D N T + PL +P
Sbjct: 231 TPRCSDDLNVTISRNGTPLTTP 252
>AC024812-6|AAF59549.2| 671|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 5 protein.
Length = 671
Score = 28.7 bits (61), Expect = 5.8
Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -3
Query: 682 CPMLRTSHTNIFTSXCTNYELFAN--YAHCVYPFISLIVSADTVWNSAIPHFDCSIPASC 509
CP+ R I CT +F N A VY IVS +W+S +P C P +
Sbjct: 176 CPLFRGIGYGI-CCICTFIAIFYNAIIAQAVY---FAIVSLSKIWDSEVPWASCGNPWN- 230
Query: 508 STALSSDANST--QRIAPLCSP 449
+ S D N T + PL +P
Sbjct: 231 TPRCSDDLNVTISRNGTPLTTP 252
>AC024776-7|AAK68469.1| 411|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform a protein.
Length = 411
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 672 NMGHVNQRRDPHSNIQPRCLRV 737
N G N+R P ++++P+CLRV
Sbjct: 357 NSGTPNERNRPQTSVRPQCLRV 378
>AC024776-5|AAK68470.3| 1090|Caenorhabditis elegans Nuclear pore
complex protein protein8, isoform b protein.
Length = 1090
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 672 NMGHVNQRRDPHSNIQPRCLRV 737
N G N+R P ++++P+CLRV
Sbjct: 272 NSGTPNERNRPQTSVRPQCLRV 293
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 306 TANIERH----KYNHELPVLDVCFRDAVHSYSGGLDQTLKMYDLNASTETI 446
T+ + RH Y PV + + +H+Y MY LNA TETI
Sbjct: 362 TSMVARHGRVITYEDSAPVAKIPTQQPIHNYPNSTQNDCDMYKLNA-TETI 411
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,976,642
Number of Sequences: 27780
Number of extensions: 498900
Number of successful extensions: 1469
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1466
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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