Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40028
(904 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory f... 32 3.3
BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory... 32 3.3
BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory... 32 3.3
BC033771-1|AAH33771.1| 533|Homo sapiens TMF1 protein protein. 32 3.3
AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory... 32 3.3
Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi dom... 31 7.6
BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing... 31 7.6
AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens ... 31 7.6
AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein. 31 7.6
>L01042-1|AAD54608.1| 1093|Homo sapiens TATA element modulatory
factor protein.
Length = 1093
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 LGQSGTPLSMEIFLNNESASVYG--LLVNYMHVTDTGKQQETINSETDVPSTRICLRTS 669
+GQS TP + E + + S V G L GK +ET+N E+D+ + L+ S
Sbjct: 139 IGQSRTPETTESQVKDSSLCVSGETLAAGTSSPKTEGKHEETVNKESDMKVPTVSLKVS 197
>BC126123-1|AAI26124.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 LGQSGTPLSMEIFLNNESASVYG--LLVNYMHVTDTGKQQETINSETDVPSTRICLRTS 669
+GQS TP + E + + S V G L GK +ET+N E+D+ + L+ S
Sbjct: 139 IGQSRTPETTESQVKDSSLCVSGETLAAGTSSPKTEGKHEETVNKESDMKVPTVSLKVS 197
>BC117418-1|AAI17419.1| 1093|Homo sapiens TATA element modulatory
factor 1 protein.
Length = 1093
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 LGQSGTPLSMEIFLNNESASVYG--LLVNYMHVTDTGKQQETINSETDVPSTRICLRTS 669
+GQS TP + E + + S V G L GK +ET+N E+D+ + L+ S
Sbjct: 139 IGQSRTPETTESQVKDSSLCVSGETLAAGTSSPKTEGKHEETVNKESDMKVPTVSLKVS 197
>BC033771-1|AAH33771.1| 533|Homo sapiens TMF1 protein protein.
Length = 533
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 LGQSGTPLSMEIFLNNESASVYG--LLVNYMHVTDTGKQQETINSETDVPSTRICLRTS 669
+GQS TP + E + + S V G L GK +ET+N E+D+ + L+ S
Sbjct: 139 IGQSRTPETTESQVKDSSLCVSGETLAAGTSSPKTEGKHEETVNKESDMKVPTVSLKVS 197
>AB209109-1|BAD92346.1| 1096|Homo sapiens TATA element modulatory
factor 1 variant protein.
Length = 1096
Score = 31.9 bits (69), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 LGQSGTPLSMEIFLNNESASVYG--LLVNYMHVTDTGKQQETINSETDVPSTRICLRTS 669
+GQS TP + E + + S V G L GK +ET+N E+D+ + L+ S
Sbjct: 142 IGQSRTPETTESQVKDSSLCVSGETLAAGTSSPKTEGKHEETVNKESDMKVPTVSLKVS 200
>Z92546-1|CAB62953.1| 822|Homo sapiens bK65A6.2 (novel Sushi domain
(SCR repeat) containing protein similar to Mucins)
protein.
Length = 822
Score = 30.7 bits (66), Expect = 7.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 694 RRIQSFQVPGEPHYVQFXGDGDRLASTGFQGGTMPXNGHDW 816
R +Q+ G + DG +L + GG+ P GHDW
Sbjct: 352 RSVQASLRYGSGQQCCYTADGTQLLTADSSGGSTPDRGHDW 392
>BC033107-1|AAH33107.1| 822|Homo sapiens sushi domain containing 2
protein.
Length = 822
Score = 30.7 bits (66), Expect = 7.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 694 RRIQSFQVPGEPHYVQFXGDGDRLASTGFQGGTMPXNGHDW 816
R +Q+ G + DG +L + GG+ P GHDW
Sbjct: 352 RSVQASLRYGSGQQCCYTADGTQLLTADSSGGSTPDRGHDW 392
>AK026431-1|BAB15481.1| 619|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22778 fis, clone KAIA1714. ).
Length = 619
Score = 30.7 bits (66), Expect = 7.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 694 RRIQSFQVPGEPHYVQFXGDGDRLASTGFQGGTMPXNGHDW 816
R +Q+ G + DG +L + GG+ P GHDW
Sbjct: 149 RSVQASLRYGSGRQCCYTADGTQLLTADSSGGSTPDRGHDW 189
>AE006463-5|AAK61225.1| 321|Homo sapiens unknown protein.
Length = 321
Score = 30.7 bits (66), Expect = 7.6
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 504 TEISPDTCFPFCLTMAPKTGSGAFPSS 424
TE PDTC P C + P+ G G S
Sbjct: 195 TESGPDTCTPQCPAVPPRAGKGTLNGS 221
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,637,875
Number of Sequences: 237096
Number of extensions: 3194880
Number of successful extensions: 6017
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6017
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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