Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40028
         (904 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058320-1|AAL13549.1|  414|Drosophila melanogaster GH08941p pro...    52   1e-06
AE013599-3033|AAF57452.2|  414|Drosophila melanogaster CG13432-P...    52   1e-06
AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p pro...    29   8.7  
AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA...    29   8.7  

>AY058320-1|AAL13549.1|  414|Drosophila melanogaster GH08941p
           protein.
          Length = 414

 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 493 RDLG-QSGTPLSMEIFLNNESASVYGLLVNYMHVTDTGKQQETI 621
           RDL  +SGTPL+MEI L+ +SA VYGL VNY+ VTDT    ET+
Sbjct: 198 RDLTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETL 241



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
 Frame = +3

Query: 27  FLQTATAKGSEAVIECTPELMKVTIPM------DGDRQVAYLDQIKDY--KPCRPEFNGK 182
           F   A AKGS  V  C+ + M+V I +      D      YL+ +K Y  + C+P+ +G 
Sbjct: 17  FCGLAQAKGSHKV-HCSEDQMRVDIGLPDAESKDQSAPQIYLEGLKGYPDERCQPQIDGS 75

Query: 183 VATFILDLQDPHKCGVTRVLNKIS 254
           +A F L L D ++CGVTR++N+++
Sbjct: 76  LAVFRLSLSDFYECGVTRMVNQLT 99



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
 Frame = +2

Query: 260 RTFYHNILIEGLDGNREAISVRCVL----------------------SGKHHNLTKRDSR 373
           + +YH I+IE   G +E +SV+C+                       SG  H L KRD  
Sbjct: 102 KVYYHKIIIESTSG-KEIVSVKCITTASPAYNVMMNATTGSSSTSTSSGGIHGLVKRD-- 158

Query: 374 AFPFDFDEPNVLNITRYEEGKAPEPVLGAIVKQNGKQVSGEISV 505
             P  F EP  L IT     +APEP L   V Q+G++ + +++V
Sbjct: 159 VLPAGFQEPEDLEITTSLTKRAPEPRLSIGVSQDGQKFTRDLTV 202



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 633 GCSVDPYLFENFVTTDGDTLTA 698
           GC+VDPYLFENF T DGD L+A
Sbjct: 245 GCTVDPYLFENFNTIDGDILSA 266


>AE013599-3033|AAF57452.2|  414|Drosophila melanogaster CG13432-PA
           protein.
          Length = 414

 Score = 52.0 bits (119), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
 Frame = +1

Query: 493 RDLG-QSGTPLSMEIFLNNESASVYGLLVNYMHVTDTGKQQETI 621
           RDL  +SGTPL+MEI L+ +SA VYGL VNY+ VTDT    ET+
Sbjct: 198 RDLTVKSGTPLTMEINLDEDSAPVYGLGVNYLDVTDTHTSSETL 241



 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
 Frame = +3

Query: 27  FLQTATAKGSEAVIECTPELMKVTIPM------DGDRQVAYLDQIKDY--KPCRPEFNGK 182
           F   A AKGS  V  C+ + M+V I +      D      YL+ +K Y  + C+P+ +G 
Sbjct: 17  FCGLAQAKGSHKV-HCSEDQMRVDIGLPDAESKDQSAPQIYLEGLKGYPDERCQPQIDGS 75

Query: 183 VATFILDLQDPHKCGVTRVLNKIS 254
           +A F L L D ++CGVTR++N+++
Sbjct: 76  LAVFRLSLSDFYECGVTRMVNQLT 99



 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 22/104 (21%)
 Frame = +2

Query: 260 RTFYHNILIEGLDGNREAISVRCVL----------------------SGKHHNLTKRDSR 373
           + +YH I+IE   G +E +SV+C+                       SG  H L KRD  
Sbjct: 102 KVYYHKIIIESTSG-KEIVSVKCITTASPAYNVMMNATTGSSSTSTSSGGIHGLVKRD-- 158

Query: 374 AFPFDFDEPNVLNITRYEEGKAPEPVLGAIVKQNGKQVSGEISV 505
             P  F EP  L IT     +APEP L   V Q+G++ + +++V
Sbjct: 159 VLPAGFQEPEDLEITTSLTKRAPEPRLSIGVSQDGQKFTRDLTV 202



 Score = 41.9 bits (94), Expect = 0.001
 Identities = 17/22 (77%), Positives = 19/22 (86%)
 Frame = +3

Query: 633 GCSVDPYLFENFVTTDGDTLTA 698
           GC+VDPYLFENF T DGD L+A
Sbjct: 245 GCTVDPYLFENFNTIDGDILSA 266


>AY118451-1|AAM49820.1|  440|Drosophila melanogaster AT01479p
           protein.
          Length = 440

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +1

Query: 301 EPRGYLCPLRLKREAPQSNEEGLQSIPFRLRRAQRAEHHSL*RREGTRAGLGSHRQAKRK 480
           E   YLC  + K E P  ++E L+ +  + +R  RAE     + E  +    SH++   K
Sbjct: 379 EENEYLCSKKSK-ECPNKDDEALKCLQLKKQRQARAEAEMKKKAELKKNNSLSHKKEDDK 437

Query: 481 A 483
           A
Sbjct: 438 A 438


>AE014297-1896|AAF55096.2| 1010|Drosophila melanogaster CG7362-PA
           protein.
          Length = 1010

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +1

Query: 301 EPRGYLCPLRLKREAPQSNEEGLQSIPFRLRRAQRAEHHSL*RREGTRAGLGSHRQAKRK 480
           E   YLC  + K E P  ++E L+ +  + +R  RAE     + E  +    SH++   K
Sbjct: 760 EENEYLCSKKSK-ECPNKDDEALKCLQLKKQRQARAEAEMKKKAELKKNNSLSHKKEDDK 818

Query: 481 A 483
           A
Sbjct: 819 A 819


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,105,486
Number of Sequences: 53049
Number of extensions: 1013474
Number of successful extensions: 2674
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2674
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)