Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40026
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   4.0  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   9.2  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   9.2  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 457 ISCHNCSYKSYPKSLCQLLKNHVNTNTS 540
           I+CH C    + K  C +  N+  T+T+
Sbjct: 202 ITCHRCRKPGHMKRDCPMESNNTPTSTT 229


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 763 FNGKCNSLPIFGPGP 807
           F G CN  P + P P
Sbjct: 83  FEGDCNEKPFYAPSP 97


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 418 MSERLIFSKENIPISCHNCSYKSYPKSLCQLLKNHVNTNTSFYP 549
           +S  L    E+ P  C  C  + + K+L  L +NHVNT+T   P
Sbjct: 142 LSRHLKTHSEDRPHKCVVCE-RGF-KTLASL-QNHVNTHTGTKP 182


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 895,374
Number of Sequences: 2352
Number of extensions: 18696
Number of successful extensions: 59
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)