Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40026
         (874 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC051718-1|AAH51718.1|  328|Homo sapiens UTY protein protein.          30   9.5  
AF000995-1|AAC51842.1| 1240|Homo sapiens ubiquitous TPR motif, Y...    30   9.5  
AF000994-1|AAC51841.1| 1347|Homo sapiens ubiquitous TPR motif, Y...    30   9.5  

>BC051718-1|AAH51718.1|  328|Homo sapiens UTY protein protein.
          Length = 328

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 549 FFIMTGNEWNQINDFCRKTNLKLVFS 626
           +F++  + W  +NDFC K NL  + S
Sbjct: 94  WFVVPEDYWGVLNDFCEKNNLNFLMS 119


>AF000995-1|AAC51842.1| 1240|Homo sapiens ubiquitous TPR motif, Y
            isoform protein.
          Length = 1240

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 549  FFIMTGNEWNQINDFCRKTNLKLVFS 626
            +F++  + W  +NDFC K NL  + S
Sbjct: 1113 WFVVPEDYWGVLNDFCEKNNLNFLMS 1138


>AF000994-1|AAC51841.1| 1347|Homo sapiens ubiquitous TPR motif, Y
            isoform protein.
          Length = 1347

 Score = 30.3 bits (65), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 549  FFIMTGNEWNQINDFCRKTNLKLVFS 626
            +F++  + W  +NDFC K NL  + S
Sbjct: 1113 WFVVPEDYWGVLNDFCEKNNLNFLMS 1138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,462,372
Number of Sequences: 237096
Number of extensions: 2661409
Number of successful extensions: 7612
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7612
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)