Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40024
         (708 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17175 Cluster: 50kDa lectin; n=1; Bombyx mori|Rep: 50k...    48   2e-04
UniRef50_UPI0000D566C7 Cluster: PREDICTED: similar to CG14230-PA...    39   0.14 
UniRef50_A5K2R9 Cluster: Putative uncharacterized protein; n=1; ...    34   3.9  
UniRef50_A0BN28 Cluster: Chromosome undetermined scaffold_117, w...    33   5.2  
UniRef50_Q236E4 Cluster: TPR Domain containing protein; n=1; Tet...    33   6.9  
UniRef50_P39730 Cluster: Eukaryotic translation initiation facto...    33   6.9  

>UniRef50_Q17175 Cluster: 50kDa lectin; n=1; Bombyx mori|Rep: 50kDa
           lectin - Bombyx mori (Silk moth)
          Length = 433

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +1

Query: 1   LQPSHAKFLMQQTEDVKSEPG 63
           LQPSHAKFLMQQTEDVKSEPG
Sbjct: 325 LQPSHAKFLMQQTEDVKSEPG 345


>UniRef50_UPI0000D566C7 Cluster: PREDICTED: similar to CG14230-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG14230-PA - Tribolium castaneum
          Length = 376

 Score = 38.7 bits (86), Expect = 0.14
 Identities = 19/40 (47%), Positives = 27/40 (67%)
 Frame = +1

Query: 127 QSQENKIEVSKETFYKVSETLKETIAQPKKFSLRSLFTKD 246
           Q QE  + VSKE FYKV + LK T+ + ++FSL  LF ++
Sbjct: 194 QEQEQPV-VSKEIFYKVEDGLKSTLEEKQEFSLLKLFGQE 232


>UniRef50_A5K2R9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1119

 Score = 33.9 bits (74), Expect = 3.9
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
 Frame = +1

Query: 124 EQSQEN-KIEVSKETFYKVSETLKETIAQPKK-FSLRSLFTKDAEQIKHLNKKQNIYHLM 297
           EQ+Q N    ++  T+ +V    K T +  K+  +L  +FT D+   KHL+ KQ      
Sbjct: 99  EQAQRNGPTALNGSTYEEVGSAQKRTSSSQKRTINLGEIFTNDSLFSKHLSNKQIFQFFK 158

Query: 298 FQRRKK 315
           F + KK
Sbjct: 159 FPKSKK 164


>UniRef50_A0BN28 Cluster: Chromosome undetermined scaffold_117,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_117,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 589

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +1

Query: 112 QEHLEQSQENKIEVSKETFY-KVSETLKETIAQPKKFSLRSLFTKDAEQIKHLNKKQNIY 288
           Q  ++Q  EN  ++  +T+  K  +  KE      KF   + FTK+ E+ KHL   Q IY
Sbjct: 515 QNVIQQWAENIYKIVHQTYLLKQKQRRKERYENKVKFIEIAFFTKEEEKQKHLELAQQIY 574


>UniRef50_Q236E4 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1357

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = +3

Query: 444 KENLFFTKQDQRLLDGLKFFNTLETQKVKKIEESLN 551
           KEN  FTK+ +RL D +     L+TQ++K+ E+S N
Sbjct: 785 KENQEFTKETKRLYDSI--IQILQTQQIKESEDSFN 818


>UniRef50_P39730 Cluster: Eukaryotic translation initiation factor
           5B; n=24; Ascomycota|Rep: Eukaryotic translation
           initiation factor 5B - Saccharomyces cerevisiae (Baker's
           yeast)
          Length = 1002

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 112 QEHLEQSQENKIEVSKETFYKVSETLKETIAQPKKFSLRSLFTKDAEQIKHLNKKQNIYH 291
           QE LE+ +E ++E  +E      E +KE     KK   ++   K   + K L +KQ    
Sbjct: 186 QEKLEREEEERLEKEEEERLANEEKMKEEAKAAKKEKEKAKREKRKAEGKLLTRKQKEEK 245

Query: 292 LMFQRRKKGIL 324
            + +RR+  +L
Sbjct: 246 KLLERRRAALL 256


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 523,471,647
Number of Sequences: 1657284
Number of extensions: 8819712
Number of successful extensions: 28380
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28366
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)