Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40024
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U42832-6|AAP40542.2|  342|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U42832-5|ABA03119.1|  468|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    30   1.9  
U39848-7|AAA80693.3|  230|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical ...    27   9.9  
AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical...    27   9.9  

>Z74475-2|CAA98958.4|  385|Caenorhabditis elegans Hypothetical
           protein R04F11.3 protein.
          Length = 385

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +1

Query: 124 EQSQENKIEVSKETFYKVS-ETLKETIAQPKKFSLRSLFTKDAEQ 255
           E+S E K  +   T  K + ET K +IA PKK    S+F+K  E+
Sbjct: 146 EKSTEQKPTIEPSTSSKSAIETKKSSIAPPKKQGTLSMFSKKTEK 190


>U42832-6|AAP40542.2|  342|Caenorhabditis elegans Hypothetical
           protein F01E11.5b protein.
          Length = 342

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 190 KETIAQPKKFS-LRSLFTKDAEQIK-HLNKKQNIYHLMFQRRKKGIL*TLEKR 342
           KE+  Q ++   +RS+     E++K H N+K+ IY    QR+ K I    E+R
Sbjct: 206 KESAIQKREAKPMRSVMAISYEKVKRHKNRKERIYRKSLQRKPKAISAAKERR 258


>U42832-5|ABA03119.1|  468|Caenorhabditis elegans Hypothetical
           protein F01E11.5c protein.
          Length = 468

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 190 KETIAQPKKFS-LRSLFTKDAEQIK-HLNKKQNIYHLMFQRRKKGIL*TLEKR 342
           KE+  Q ++   +RS+     E++K H N+K+ IY    QR+ K I    E+R
Sbjct: 332 KESAIQKREAKPMRSVMAISYEKVKRHKNRKERIYRKSLQRKPKAISAAKERR 384


>U42832-4|AAA83574.4|  462|Caenorhabditis elegans Hypothetical
           protein F01E11.5a protein.
          Length = 462

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
 Frame = +1

Query: 190 KETIAQPKKFS-LRSLFTKDAEQIK-HLNKKQNIYHLMFQRRKKGIL*TLEKR 342
           KE+  Q ++   +RS+     E++K H N+K+ IY    QR+ K I    E+R
Sbjct: 326 KESAIQKREAKPMRSVMAISYEKVKRHKNRKERIYRKSLQRKPKAISAAKERR 378


>Z81128-3|CAB03401.1|  410|Caenorhabditis elegans Hypothetical
           protein T23D8.3 protein.
          Length = 410

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/67 (22%), Positives = 33/67 (49%)
 Frame = +1

Query: 112 QEHLEQSQENKIEVSKETFYKVSETLKETIAQPKKFSLRSLFTKDAEQIKHLNKKQNIYH 291
           +E  +  ++ + +  KE+ +    T +     P++ SLR    K+A +++ + KK N   
Sbjct: 330 EEDEDDDEDMEDDDDKESVFSTVSTFRPKNETPEQRSLRKKAVKEARKLRRVEKKANKTM 389

Query: 292 LMFQRRK 312
              ++RK
Sbjct: 390 FAEEKRK 396


>Z70206-1|CAA94124.1|  407|Caenorhabditis elegans Hypothetical
           protein C49F8.1 protein.
          Length = 407

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 686 LNLIELHWATSFFXYRILHSFLLPPIFL 603
           +N   L +++SFF +  LHSF  PP FL
Sbjct: 56  MNFSFLSFSSSFFHFFSLHSFFTPPPFL 83


>U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical
           protein F09C12.6 protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
 Frame = -2

Query: 314 FFLLWNIKWYIFCFLLRC--FICSASLVNKLLK---LNFLGCAIVSFSVSLTL*KVSLDT 150
           F  + NI  Y+F FL+ C   I ++S +NKL++   +N     ++SF +S  L  VS+  
Sbjct: 196 FIYICNISGYLFSFLINCITMIKASSTINKLVRRQIINVRYSLVISF-ISFVL--VSIPN 252

Query: 149 SI 144
           +I
Sbjct: 253 AI 254


>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -1

Query: 324 KDSLFSSLEHQVVYILFLVEVLYLFCIFSEQTSQAKFFRLCNSLFQCFANFI 169
           +D ++  L      + FLV  ++++ IFSE++S+   +R    L+  F NFI
Sbjct: 3   EDWIYKYLSRTSCALTFLVNPIFIYLIFSEKSSKFGNYRFL-LLYFAFFNFI 53


>U39848-7|AAA80693.3|  230|Caenorhabditis elegans Hypothetical
           protein B0286.1 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = +3

Query: 474 QRLLDGLKFFNTLETQKVKKIEE 542
           Q+LL G +   TLE  KVKK+EE
Sbjct: 176 QKLLLGRELVQTLEEAKVKKLEE 198


>AF024492-3|AAF98619.1|  918|Caenorhabditis elegans Hypothetical
           protein F14F9.4 protein.
          Length = 918

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
 Frame = +1

Query: 124 EQSQENKIEVSKETFYKVSETLKETIAQPKKFSLRSL-----FTKDAEQIKHLNKKQNIY 288
           +QS+++K     E  Y++ E+LK        F+++       +T ++ +I   N+KQN+ 
Sbjct: 304 KQSRKSKRN-DNEMSYEIVESLKPETEYCNLFNIQDYLRNEGYTFESAEITFHNQKQNME 362

Query: 289 HLMFQRRKK 315
           H M Q R++
Sbjct: 363 HQMEQLREE 371


>AC084153-16|AAK84590.1|  233|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.16 protein.
          Length = 233

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = +2

Query: 518 TEGQKDRRELKSLMKRRIYNKERKIKYSTRKLVVEENYEESYRXKN*WPSVTQLNLK 688
           +  + +RR  K   KR   N+ER  +YS  K     N     R ++  P   Q N +
Sbjct: 2   SSSEDNRRTKKDYKKRSKQNRERSRRYSNCKKPQPLNKPSPVRDRSRTPKAPQFNCR 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,656,592
Number of Sequences: 27780
Number of extensions: 233055
Number of successful extensions: 765
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)