Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40021
(381 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 140 1e-33
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 140 1e-33
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 140 1e-33
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 140 1e-33
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 140 1e-33
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 137 1e-32
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 76 4e-14
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 74 1e-13
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 67 2e-11
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 1.6
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 1.6
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 1.6
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 1.6
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 1.6
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 1.6
AL137619-1|CAB70845.1| 617|Homo sapiens hypothetical protein pr... 30 2.9
AK074178-1|BAB85004.1| 1007|Homo sapiens FLJ00251 protein protein. 30 2.9
BC125073-1|AAI25074.1| 492|Homo sapiens ZDHHC14 protein protein. 29 5.0
BC125072-1|AAI25073.1| 492|Homo sapiens ZDHHC14 protein protein. 29 5.0
BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein. 29 5.0
BC056399-1|AAH56399.1| 201|Homo sapiens ZDHHC14 protein protein. 29 5.0
AL450328-4|CAI39701.1| 371|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL450328-2|CAI39699.1| 488|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL450328-1|CAI39698.1| 253|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,... 29 5.0
AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,... 29 5.0
AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,... 29 5.0
AL133510-4|CAI42855.1| 371|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL133510-2|CAI42853.1| 488|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL133510-1|CAI42852.1| 253|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein pr... 29 5.0
AL117344-2|CAI20404.1| 488|Homo sapiens zinc finger, DHHC-type ... 29 5.0
AK024637-1|BAB14941.1| 143|Homo sapiens protein ( Homo sapiens ... 29 5.0
AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein. 29 5.0
AF542389-1|AAN47143.1| 473|Homo sapiens NEW1 domain containing ... 29 5.0
AF542388-1|AAN47142.1| 488|Homo sapiens NEW1 domain containing ... 29 5.0
AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING d... 28 8.7
AB075864-1|BAB85570.1| 339|Homo sapiens KIAA1984 protein protein. 28 8.7
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 73.7 bits (173), Expect = 2e-13
Identities = 34/48 (70%), Positives = 38/48 (79%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 140 bits (340), Expect = 1e-33
Identities = 63/86 (73%), Positives = 77/86 (89%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 137 bits (332), Expect = 1e-32
Identities = 62/86 (72%), Positives = 76/86 (88%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 80
P V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNM 177
Query: 79 LNISPFSYGLVVKQVYDSGTIFAPEI 2
LNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 178 LNISPFSFGLVIQQVFDNGSIYNPEV 203
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 75.8 bits (178), Expect = 4e-14
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 124
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 146
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 118 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 74.1 bits (174), Expect = 1e-13
Identities = 32/42 (76%), Positives = 40/42 (95%)
Frame = -3
Query: 127 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 2
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEV 43
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 67.3 bits (157), Expect = 2e-11
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 381 KLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPCQSSFP 238
KLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIAPC+ + P
Sbjct: 77 KLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVP 123
Score = 64.9 bits (151), Expect = 8e-11
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3
Query: 259 PMSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 146
P V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 117 PCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 27 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 146
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL137619-1|CAB70845.1| 617|Homo sapiens hypothetical protein
protein.
Length = 617
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 72 MFNMLRRVASEAPTLSPGFKMC--TSLMIS-IVPFEILVGIERA-WKKEVFSGPRPVLWA 239
+F + R+A+ T + G + T L S + P E L +E + W +F P+ + A
Sbjct: 308 LFKIQNRLAAMEDTSTQGCQPVEITHLYPSGLSPQEFLGWLEGSCWHHGIF--PKVLRAA 365
Query: 240 GMTTDMGQWHQDELELGLCSPTVCHGPQRG 329
G +MGQ Q E +G+ +C G G
Sbjct: 366 GQCNNMGQKRQTEESIGIQHWIICDGASNG 395
>AK074178-1|BAB85004.1| 1007|Homo sapiens FLJ00251 protein protein.
Length = 1007
Score = 29.9 bits (64), Expect = 2.9
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +3
Query: 72 MFNMLRRVASEAPTLSPGFKMC--TSLMIS-IVPFEILVGIERA-WKKEVFSGPRPVLWA 239
+F + R+A+ T + G + T L S + P E L +E + W +F P+ + A
Sbjct: 698 LFKIQNRLAAMEDTSTQGCQPVEITHLYPSGLSPQEFLGWLEGSCWHHGIF--PKVLRAA 755
Query: 240 GMTTDMGQWHQDELELGLCSPTVCHGPQRG 329
G +MGQ Q E +G+ +C G G
Sbjct: 756 GQCNNMGQKRQTEESIGIQHWIICDGASNG 785
>BC125073-1|AAI25074.1| 492|Homo sapiens ZDHHC14 protein protein.
Length = 492
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 381 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 419
>BC125072-1|AAI25073.1| 492|Homo sapiens ZDHHC14 protein protein.
Length = 492
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 381 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 419
>BC062352-1|AAH62352.1| 771|Homo sapiens TAF3 protein protein.
Length = 771
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 694 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 727
>BC056399-1|AAH56399.1| 201|Homo sapiens ZDHHC14 protein protein.
Length = 201
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 90 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 128
>AL450328-4|CAI39701.1| 371|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 371
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 260 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 298
>AL450328-2|CAI39699.1| 488|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 488
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 377 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 415
>AL450328-1|CAI39698.1| 253|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 253
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 142 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 180
>AL390294-1|CAH73142.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 637 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 670
>AL353754-1|CAH73451.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 637 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 670
>AL159172-1|CAI15661.1| 929|Homo sapiens TAF3 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 140kD
protein.
Length = 929
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 637 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 670
>AL133510-4|CAI42855.1| 371|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 371
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 260 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 298
>AL133510-2|CAI42853.1| 488|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 488
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 377 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 415
>AL133510-1|CAI42852.1| 253|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 253
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 142 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 180
>AL117661-1|CAB56032.1| 681|Homo sapiens hypothetical protein
protein.
Length = 681
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 615 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 648
>AL117344-2|CAI20404.1| 488|Homo sapiens zinc finger, DHHC-type
containing 14 protein.
Length = 488
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 377 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 415
>AK024637-1|BAB14941.1| 143|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20984 fis, clone CAE00871. ).
Length = 143
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 32 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 70
>AJ292190-1|CAC34475.1| 727|Homo sapiens TAFII140 protein protein.
Length = 727
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -1
Query: 321 EVRDKLLENKVQAPARPGAIAPCQSSFPPTTPAS 220
+V+DK E+K++APA P + P + + P +PA+
Sbjct: 637 KVKDKGREDKMKAPAPPLVLPPKELALPLFSPAT 670
>AF542389-1|AAN47143.1| 473|Homo sapiens NEW1 domain containing
protein isoform protein.
Length = 473
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 362 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 400
>AF542388-1|AAN47142.1| 488|Homo sapiens NEW1 domain containing
protein protein.
Length = 488
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = -1
Query: 327 LVEVRDKLLENKVQAPARPGAIAPCQSSF--PPTTPASV 217
L++ L +++ P +PG PC S PPT PAS+
Sbjct: 377 LLQSEPSLTSDELHLPGKPGLGTPCASLTLGPPTPPASM 415
>AK223409-1|BAD97129.1| 777|Homo sapiens BRCA1 associated RING
domain 1 variant protein.
Length = 777
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 229 TGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLN 74
+GL E+ L++ K K T H++ PGD V ++ +L +LN
Sbjct: 575 SGLSSEQQKMLSGLAVILKAKKYTEFDSTVTHVVVPGDAVQSTLKCMLGILN 626
>AB075864-1|BAB85570.1| 339|Homo sapiens KIAA1984 protein protein.
Length = 339
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = +3
Query: 225 PVLWAGMTTDMGQW--HQDELELGLCSPTVC-HGP--QRGLRG*TRSQRC 359
PV WA +T G H LG+C PT C GP G G TR+ C
Sbjct: 7 PVPWAPVTPASGGQVSHHPTRGLGICEPTSCSRGPLWLSGQLGDTRALLC 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,519,984
Number of Sequences: 237096
Number of extensions: 1351859
Number of successful extensions: 3357
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 3244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3357
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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