Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40021
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    25   0.23 
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    25   0.23 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.40 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   2.8  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.7  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   3.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   4.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        20   8.5  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   8.5  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 121 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 8
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 121 GDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAP 8
           G+  G S  +L     ISP + GLV + +  SGT+ AP
Sbjct: 251 GESAGGSSVSLHL---ISPVTRGLVRRGILQSGTLNAP 285


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 0.40
 Identities = 11/42 (26%), Positives = 19/42 (45%)
 Frame = +3

Query: 132 MCTSLMISIVPFEILVGIERAWKKEVFSGPRPVLWAGMTTDM 257
           +C   ++ +  +  L      WK     GP+PV + G T D+
Sbjct: 8   LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDL 49


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 203 FLPGSFYPYQDFKGYY*NHQ 144
           FLP S++P+Q     Y  H+
Sbjct: 311 FLPPSYHPHQHHPSQYHPHR 330


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = +2

Query: 119 TGLQDVYIVDDFN 157
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +3

Query: 273 DELELGLCSPTVCHGPQR 326
           D +E G+  PT C G  +
Sbjct: 361 DAVEYGIIGPTTCMGDHK 378


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 157 IEIINDVHILKPGDKVGASEATLLN 83
           I I+N  HIL+   K G S   L+N
Sbjct: 480 IGIVNQFHILQFITKNGTSNNYLIN 504


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 39  CLTTRPYENGEMFNMLRRVA 98
           CL  R Y N E+   ++R+A
Sbjct: 345 CLQFREYLNNELGPAVKRIA 364


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 24  PESYTCLTTRPYENG 68
           PE+ TC  +  Y NG
Sbjct: 167 PENNTCSISNSYTNG 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,115
Number of Sequences: 438
Number of extensions: 2187
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)