Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40020
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.1  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   7.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    22   7.1  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   9.4  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 681 EDEYEGFSQKKKMVXEPLWVN*GQR 755
           +DE E  S K   +  PL ++ GQR
Sbjct: 27  QDEPENLSNKSNSITVPLSISTGQR 51


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 111 EDHLSMISYVRSRYDQYMYFY 173
           +D LS+  Y R R + Y++ Y
Sbjct: 105 DDLLSVAVYARDRVNPYLFSY 125


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 389 FRTTQCKKKTELF*SIKLRFLVKN 460
           F   QC   TEL   ++ RF++ N
Sbjct: 176 FNVAQCYLTTELVLMLQTRFVILN 199


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 718 WFXNHCGLIEAKGGN 762
           WF  H G I+   GN
Sbjct: 142 WFAEHMGQIKVASGN 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,283
Number of Sequences: 336
Number of extensions: 3926
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)