Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40017
(868 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zi... 38 0.011
At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zi... 38 0.011
At1g10890.1 68414.m01251 F-box family protein contains Pfam PF00... 35 0.081
At2g32760.1 68415.m04008 expressed protein 34 0.11
At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50... 34 0.11
At5g52550.1 68418.m06525 expressed protein 34 0.14
At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727 ... 34 0.14
At3g28770.1 68416.m03591 expressed protein 33 0.25
At5g57120.1 68418.m07132 expressed protein weak similarity to SP... 32 0.43
At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative simila... 32 0.43
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 32 0.57
At4g25160.1 68417.m03622 protein kinase family protein contains ... 32 0.57
At5g04890.1 68418.m00513 small heat shock-like protein (RTM2) si... 31 1.00
At4g36120.1 68417.m05141 expressed protein 31 1.00
At2g21720.1 68415.m02584 hypothetical protein contains Pfam prof... 31 1.3
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 31 1.3
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 30 1.7
At1g42440.1 68414.m04894 expressed protein contains Pfam domain,... 30 2.3
At1g17070.1 68414.m02077 D111/G-patch domain-containing protein ... 30 2.3
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 29 3.0
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 29 3.0
At1g47900.1 68414.m05334 expressed protein 29 3.0
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 3.0
At1g05320.1 68414.m00539 myosin-related similar to non-muscle my... 29 3.0
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 3.0
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 4.0
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 29 4.0
At3g20350.1 68416.m02578 expressed protein 29 4.0
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 29 4.0
At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase carboxyl... 29 4.0
At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase carboxyl... 29 4.0
At5g59390.1 68418.m07442 XH/XS domain-containing protein contain... 29 5.3
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 29 5.3
At4g18240.1 68417.m02709 starch synthase-related protein contain... 28 7.0
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 7.0
At1g56440.1 68414.m06491 serine/threonine protein phosphatase-re... 28 7.0
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 28 7.0
At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1) a... 28 9.3
At5g07980.1 68418.m00928 dentin sialophosphoprotein-related cont... 28 9.3
>At3g48670.2 68416.m05314 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Frame = +2
Query: 251 NLTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQE----KVESLTSAINVAEKNNA 418
+L + + E++ R ++L+ +N ++ + K ++ ++E K E L + EKN
Sbjct: 249 DLKTIAELTEEEARKQELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQ- 307
Query: 419 EIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKM 541
+K EL+AI ++ S I+ E LKRL E R+K+
Sbjct: 308 --QKHYRELNAIQERTMSHIQKIVDDHEKLKRLLESERKKL 346
>At3g48670.1 68416.m05313 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 647
Score = 37.5 bits (83), Expect = 0.011
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Frame = +2
Query: 251 NLTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQE----KVESLTSAINVAEKNNA 418
+L + + E++ R ++L+ +N ++ + K ++ ++E K E L + EKN
Sbjct: 249 DLKTIAELTEEEARKQELLVQNLRQLVEEKKKDMKEIEELCSVKSEELNQLMEEKEKNQ- 307
Query: 419 EIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKM 541
+K EL+AI ++ S I+ E LKRL E R+K+
Sbjct: 308 --QKHYRELNAIQERTMSHIQKIVDDHEKLKRLLESERKKL 346
>At1g10890.1 68414.m01251 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 592
Score = 34.7 bits (76), Expect = 0.081
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Frame = +2
Query: 260 QLQKTEEDKV-RLEKLINENSAEVHKNGKLEVP---MLQEKVESLTSAINVAEKNNAEIE 427
+L+ EE+ V R+E+ I + E ++ K+++ +L+E + L + + E
Sbjct: 78 ELKLIEEETVKRVEEAIRKKVEESLQSEKIKMEILTLLEEGRKRLNEEVAAQLEEEKEAS 137
Query: 428 KIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRK-MS*VLKWETTKGPLKEL-TSKM 601
I+A+ +Q E E ++ +ENLKR+ E R++ M K E L+EL K
Sbjct: 138 LIEAKEKEEREQQEKE-ERERIAEENLKRVEEAQRKEAMERQRKEEERYRELEELQRQKE 196
Query: 602 EGNREKVIQMDRQ*IPTRGLLPR*K 676
E R K + + + + LL + K
Sbjct: 197 EAMRRKKAEEEEERLKQMKLLGKNK 221
>At2g32760.1 68415.m04008 expressed protein
Length = 352
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Frame = +2
Query: 356 MLQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRR 535
+LQ K+ESL + + E+E+++ L A + A KVT++++K+ E L
Sbjct: 52 ILQPKLESLIQVSTESLRRTNELEEMRQRLEARKLLVDKTSVACKVTEQDVKKKEENLST 111
Query: 536 KMS*VLKWETT----KGPLKELTSKMEG 607
++ +L TT K L+E ++EG
Sbjct: 112 EVRSLLVGGTTLSIAKSKLQESNCQLEG 139
>At2g31970.1 68415.m03906 DNA repair-recombination protein (RAD50)
identical to DNA repair-recombination protein GI:7110148
from [Arabidopsis thaliana]
Length = 1316
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 395 NVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKG 574
++ EK ++++ A +LA E+ +K +L R + LRR + L + TTK
Sbjct: 989 DIQEKQRLSDSQLQS-CEARKNELAGELNRNK----DLMRNQDQLRRNIEDNLNYRTTKA 1043
Query: 575 PLKELTSKMEGNREKVIQM 631
++ELT ++E E+++ +
Sbjct: 1044 KVEELTREIESLEEQILNI 1062
>At5g52550.1 68418.m06525 expressed protein
Length = 360
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/95 (27%), Positives = 45/95 (47%)
Frame = +2
Query: 206 ETEAICIKT*EKTD*NLTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLT 385
E A K ++ D L ++++ E K RLEK I ++A + + K ++ L+E+
Sbjct: 72 EDSADAAKKKQERD-ELERIKQAENKKNRLEKSIATSAAIMAELEKKKLRKLEEQKRLAE 130
Query: 386 SAINVAEKNNAEIEKIKAELHAISQQLASEIEAHK 490
+AEK +EK A AI +L + + K
Sbjct: 131 EGAAIAEKKKRRLEKAIATTAAIRAELEKKKQMKK 165
>At5g20470.1 68418.m02433 myosin, putative similar to PIR|T00727
myosin heavy chain PCR43 [Arabidopsis thaliana]
Length = 556
Score = 33.9 bits (74), Expect = 0.14
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = +2
Query: 347 EVPML---QEKVESLTSAINV--AEKNNAE-IEKIKAELHAISQQLASEIEAHKVTKENL 508
E+P+L EK+ SLTS + AE+ AE +EK +E A + +LA+E+E + L
Sbjct: 183 EIPVLVEDTEKINSLTSEVEALKAERQAAEHLEKAFSETEARNSELATELENATRKADQL 242
Query: 509 KRLNEMLRRKMS 544
+ L K+S
Sbjct: 243 HESVQRLEEKLS 254
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 33.1 bits (72), Expect = 0.25
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Frame = +2
Query: 236 EKTD*NLTQLQKTEEDKVRLEKLINENS--AEVHKNGKLE---VPMLQEKVESLTSAINV 400
EK ++ +K EEDK +EKL ++NS + KN K + V +++++ + N
Sbjct: 1101 EKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENE 1160
Query: 401 AEKNNAEIEKIKAELHAI--SQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKG 574
+ EIE K++ + + ++ +S+ + K KE + + L++ K + +
Sbjct: 1161 EKSETKEIESSKSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEE 1220
Query: 575 PLKELTSKMEGNREK 619
K+ +K E N+ K
Sbjct: 1221 NKKQKETKKEKNKPK 1235
>At5g57120.1 68418.m07132 expressed protein weak similarity to
SP|Q14978 Nucleolar phosphoprotein p130 {Homo sapiens}
Length = 330
Score = 32.3 bits (70), Expect = 0.43
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 10/131 (7%)
Frame = +2
Query: 257 TQLQKTEEDKVR-LEKLINENSAEVHKNGKLEVPMLQEKVESLTSAI---NVAEKNNAEI 424
T+++ TEE+KV+ + +I + E K + +V + +E+ T A+ V EK +
Sbjct: 100 TKVEVTEEEKVKETDAVIEDGVKEKKKKKETKVKVTEEEKVKETDAVIEDGVKEKKKKKS 159
Query: 425 EKIKAELHAISQQLASEIEAHKV--TKENLKRLNEMLRRKMS*VLKWETTKG----PLKE 586
+ E ++++ + + + TKE + +E +R+ E +G P+KE
Sbjct: 160 KSKSVEADDDKEKVSKKRKRSEPEETKEETEDDDEESKRRKKEENVVENDEGVQETPVKE 219
Query: 587 LTSKMEGNREK 619
+K GN EK
Sbjct: 220 TETKENGNAEK 230
>At1g16280.1 68414.m01949 DEAD/DEAH box helicase, putative similar
to gb|L13612 DEAD-box protein (dbp45A) from Drosophila
melanogaster and is a member of PF|00270 DEAD/DEAH box
helicase family
Length = 491
Score = 32.3 bits (70), Expect = 0.43
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +3
Query: 15 AIKMLEEKDIIII-SLKDEIEKLKHQSLNSSEVPNEDNMSTSTMSKADETARMRDLDETF 191
A+ ++ E D+ +I +++E+ K K + N + D++ + +SKA A M+ LD F
Sbjct: 402 AVSIITETDVKLIHKIEEEVGK-KMEPYNKKVIT--DSLEVTKVSKAKRVAMMKMLDNGF 458
Query: 192 EEK 200
E+K
Sbjct: 459 EDK 461
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/95 (22%), Positives = 49/95 (51%)
Frame = +2
Query: 260 QLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKA 439
+L TE + L++ I V K K ++ + ++++ S+ ++ KN E+EK+K+
Sbjct: 360 KLHDTETEITDLKERIVTLETTVAKQ-KEDLEVSEQRLGSVEEEVS---KNEKEVEKLKS 415
Query: 440 ELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS 544
EL + ++ ++ + ++RL+E + +S
Sbjct: 416 ELETVKEEKNRALKKEQDATSRVQRLSEEKSKLLS 450
>At4g25160.1 68417.m03622 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 835
Score = 31.9 bits (69), Expect = 0.57
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +2
Query: 413 NAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKGPLKELT 592
N E+EK++AEL + + A A T + ++L E+ +R++ +K E K LKE
Sbjct: 350 NFEVEKLRAELRHVQEMYA---VAQTETFDASRKLGELNQRRLEEAIKLEELK--LKEYE 404
Query: 593 SKMEGNREK 619
++ +EK
Sbjct: 405 ARELAEKEK 413
>At5g04890.1 68418.m00513 small heat shock-like protein (RTM2)
similar to 17.9 kDa heat-shock protein [Helianthus
annuus] GI:11990130; contains Pfam profile PF00011:
Hsp20/alpha crystallin family; supporting cDNA
gi|7407072|gb|AF208051.1|AF208051; identical to cDNA
small heat shock-like protein (RTM2) GI:7407072, small
heat shock-like protein [Arabidopsis thaliana]
GI:7407073
Length = 366
Score = 31.1 bits (67), Expect = 1.00
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = +2
Query: 254 LTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAE-KNNAEIEK 430
L + K EE ++ E E E K K + +L+EK + A+ K AE+ K
Sbjct: 123 LEKAAKLEEKRLLEESRRKEKEEEEAKQMKKQ--LLEEKEALIRKLQEEAKAKEEAEMRK 180
Query: 431 I----KAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*V-LKWETTKGPLKELTS 595
+ KA+ A +++L EIEA + +E + RK+ + L E ++E S
Sbjct: 181 LQEEAKAKEEAAAKKLQEEIEAKEKLEERKLEERRLEERKLEDMKLAEEAKLKKIQERKS 240
Query: 596 KME-GNREKVIQ 628
E G +EK+++
Sbjct: 241 VDESGEKEKILK 252
>At4g36120.1 68417.m05141 expressed protein
Length = 981
Score = 31.1 bits (67), Expect = 1.00
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 LTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPM---LQEKVESLTSAINVAEKNNAEI 424
L + + ++ K LE I+E S +H+ + LQE+ E + K A++
Sbjct: 168 LAKTSQWDKIKAELEGKIDELSEGLHRAASDNAALTRSLQERSEMIVRISEERSKAEADV 227
Query: 425 EKIKAELHAISQQLA-SEIEAHKVTKE 502
EK+K L ++++ + + H +KE
Sbjct: 228 EKLKTNLQLAEKEISYLKYDLHVASKE 254
>At2g21720.1 68415.m02584 hypothetical protein contains Pfam
profile: PF04842 plant protein of unknown function
(DUF639)
Length = 703
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 290 RLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLA 469
+L +I E ++ K ++V +E + SL SA+N + + IEK +A + ++
Sbjct: 475 QLGDMIKEEGEDICKEKVVKVTDKEEMLASLESAVNQSREEGKVIEKARATTAELEEEGI 534
Query: 470 SE 475
SE
Sbjct: 535 SE 536
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/96 (21%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRK 538
L+++ + + +A N E+ E+E++ E H+ L +I+ + ++ K N L K
Sbjct: 341 LEQEGKVVNTAKNALEERVKELEQMGKEAHSAKNALEEKIKQLQQMEKETKTANTSLEGK 400
Query: 539 M----S*VLKWETTKGPLKELTSKMEGNREKVIQMD 634
+ ++ W+T ++E+ K E N ++ Q +
Sbjct: 401 IQELEQNLVMWKT---KVREMEKKSESNHQRWSQKE 433
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +2
Query: 365 EKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS 544
+ ++S + N I ++ E+H + LA+E E+H +K+LN +L +K +
Sbjct: 299 DNIDSNSMLENSLTAKEKIISELNMEIHNVETALANERESHVA---EIKKLNSLLNKKDT 355
Query: 545 *V--LKWETTKGPLKELTSKMEGNREKVIQ 628
+ +K E + P +L + + K++Q
Sbjct: 356 IIEEMKKELQERPSAKLVDDLR-KKVKILQ 384
>At1g42440.1 68414.m04894 expressed protein contains Pfam domain,
PF04950: Protein of unknown function (DUF663)
Length = 793
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = +3
Query: 3 ERDSAIKMLEEKDIIIISLKDEIEKLKHQSLNSSEVPNE 119
E + +M++++D+ +KDEI+K+K + E P+E
Sbjct: 446 ETQNESEMVDDEDLTEEQIKDEIKKIKEAYADDEEFPDE 484
>At1g17070.1 68414.m02077 D111/G-patch domain-containing protein
Similar to SP|Q9ERA6 Tuftelin-interacting protein 11
{Mus musculus}; contains Pfam profile PF01585: G-patch
domain
Length = 849
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 3 ERDSAIKMLEEKDIIIISLKDEIEKLKHQSLNSSEVPNEDNMSTSTMSKADETA-RMRDL 179
ER+SA+ + +EK+++I + + L++ + E+ + +TS D A R DL
Sbjct: 371 ERESALSLQQEKEMLINEEEKQKRHLENMEYIADEISRIELENTSGNLTLDSLAIRFEDL 430
Query: 180 DETFEEKY 203
++ + Y
Sbjct: 431 QTSYPDDY 438
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.5 bits (63), Expect = 3.0
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +2
Query: 266 QKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAI-NVAEKNNAEIEKIKAE 442
+KTEE K + N++ E K++ EKV++ + + +V E + E++K E
Sbjct: 283 EKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESVEETTQEKEEEVKEE 342
Query: 443 LHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREKV 622
++ E E KV +++ K E + + +K + K +KE S EG +++V
Sbjct: 343 GKERVEE--EEKEKEKVKEDDQK---EKVEEEEKEKVKGDEEKEKVKEEES-AEGKKKEV 396
Query: 623 IQ 628
++
Sbjct: 397 VK 398
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 254 LTQLQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEK--NNAEIE 427
+ +L+KT+++ LE + + + E+ L + E L S ++ N AE+E
Sbjct: 339 ILELEKTKKEIKMLENALQGAARQAQAKAD-EIAKLMHENEQLKSVTEDLKRKSNEAEVE 397
Query: 428 KIKAELHAISQQLASEIEAHKVTKENLKR 514
++ E H L ++ A ++ L+R
Sbjct: 398 SLREEYHQRVATLERKVYALTKERDTLRR 426
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 359 LQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLAS-EIEAHKVTKE 502
LQE+ L + +AEIE +K+ L +++ S + E H V+KE
Sbjct: 246 LQERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKE 294
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +2
Query: 365 EKVESLTSAINVAE----KNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLR 532
EK++ L I + + EIEK+K+E+ A++ +LA A K+ ++ L + +
Sbjct: 836 EKIDRLAGYIQEVQLARVEEQEEIEKVKSEVDALTSKLAETQTALKLVEDALSTAEDNIS 895
Query: 533 R 535
R
Sbjct: 896 R 896
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +3
Query: 9 DSAIKMLEEKDIIIISLKDEIEKLK 83
DS K +E+ ++ SLK+E+EKLK
Sbjct: 1007 DSLSKQIEDDKVLTTSLKNELEKLK 1031
>At1g05320.1 68414.m00539 myosin-related similar to non-muscle
myosin II heavy chain (GI:19879404) [Loligo pealei];
ESTs gb|AA042402,gb|ATTS1380 come from this gene
Length = 828
Score = 29.5 bits (63), Expect = 3.0
Identities = 23/89 (25%), Positives = 41/89 (46%)
Frame = +2
Query: 323 EVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKAELHAISQQLASEIEAHKVTKE 502
E K +++ QEKV L S++N + N+E+E+ +L Q+ A + V+ +
Sbjct: 181 EEGKKSSIQMQEYQEKVSKLESSLNQSSARNSELEE---DLRIALQKGAEHEDIGNVSTK 237
Query: 503 NLKRLNEMLRRKMS*VLKWETTKGPLKEL 589
L + + LK E + LK+L
Sbjct: 238 RSVELQGLFQTSQ---LKLEKAEEKLKDL 263
Score = 27.9 bits (59), Expect = 9.3
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Frame = +2
Query: 290 RLEKLINENSAEVHKNGKLEVPMLQE--KVESLTSAI----------NVAEKNNAEIEK- 430
+L L+ E S K ++E+ + +E KV LTS + +V E+ ++ K
Sbjct: 592 KLSALVAEKSVLESKFEQVEIHLKEEVEKVAELTSKLQEHKHKASDRDVLEEKAIQLHKE 651
Query: 431 IKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKGPLKELTSKMEGN 610
++A AIS+Q + H + LK+ E L K S ++ E+ L++ K+
Sbjct: 652 LQASHTAISEQKEALSHKHSELEATLKKSQEELDAKKSVIVHLESKLNELEQKV-KLADA 710
Query: 611 REKV 622
+ KV
Sbjct: 711 KSKV 714
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 371 VESLTSAINVAEKNNA---EIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEML 529
+++ SA E+ A E+E + A+L ++QL EIE + TKE K+L E+L
Sbjct: 195 IKNRESAARSRERKQAYQVELETLAAKLEEENEQLLKEIE--ESTKERYKKLMEVL 248
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.1 bits (62), Expect = 4.0
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +2
Query: 407 KNNAEIEKIKAELHAISQQLASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKGPLKE 586
K+ EIE + +E + + +QLAS A + + + RL E+ + + E + K+
Sbjct: 765 KSQREIESLNSEHNYLEKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQ 824
Query: 587 LTSKMEGNRE 616
L K++ N E
Sbjct: 825 LKDKLQTNIE 834
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 29.1 bits (62), Expect = 4.0
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Frame = +2
Query: 266 QKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQ----EKVESLTSAINVAEKNNAEIEKI 433
+K +E +E+ +N E+ K +LE M+Q E+ E+ A+ +AEK+ E EK+
Sbjct: 247 EKLDERARLIEQRAIKNEEEMEKT-RLEREMIQKAMCEQNEANEEAMKLAEKHQKEKEKL 305
Query: 434 KAELHAI------SQQLASEIEAHKVTKENLKRL 517
+ + +Q+L EIE K T +K +
Sbjct: 306 HKRIMEMEAKLNETQELELEIEKLKGTTNVMKHM 339
>At3g20350.1 68416.m02578 expressed protein
Length = 673
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 60 KDEIEKLKHQSLN-SSEVPNEDNMSTSTMSKADETARMRDLDE--TFEEKY 203
K EIE LK +S+N EV +E M +E +M+ +D T EEKY
Sbjct: 337 KAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDAKVTLEEKY 387
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 11/65 (16%)
Frame = +2
Query: 347 EVPMLQEKVESLTSAINV-----------AEKNNAEIEKIKAELHAISQQLASEIEAHKV 493
EV +L+ VE L INV AE+ + E+++ ELH I QQ+ S A +
Sbjct: 2250 EVKLLEGSVEELEYTINVLENKVNVVKDEAERQRLQREELEMELHTIRQQMESARNADEE 2309
Query: 494 TKENL 508
K L
Sbjct: 2310 MKRIL 2314
Score = 28.3 bits (60), Expect = 7.0
Identities = 26/112 (23%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Frame = +2
Query: 287 VRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKA-ELHAISQQ 463
+++ +++ NS++ + LEV L++++ EK IE+I+ + ++ Q
Sbjct: 2486 LKIAEMLQHNSSDSRERD-LEVSHLKQQLNEYN------EKRQGWIEEIEGKQTELVTAQ 2538
Query: 464 LASEIEAHKVTKENLKRLNEMLRRKMS*VLKWETTKGPLKELTSKMEGNREK 619
+ ++E H+ ++ LK+ NE+L+ + + VLK + + LK + + +R K
Sbjct: 2539 I--KLEEHRQYQQLLKKENELLKEENN-VLKLQLDELNLKLRRADVSVSRAK 2587
>At2g38040.2 68415.m04670 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 275 EEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKAELHAI 454
EE + + ++ S+E H L P+L EK+E L N + E +K++L+ +
Sbjct: 488 EERLTAMREEFSKASSEEH----LMHPVLIEKIEKLKEEFNTRLTDAPNYESLKSKLNML 543
Query: 455 S--QQLASEIEAHKVTKENLKRLNEMLRR 535
+ + EA + KE KR E + R
Sbjct: 544 RDFSRAKAASEATSLKKEINKRFQEAVDR 572
>At2g38040.1 68415.m04669 acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit family contains Pfam
profile: PF03255: Acetyl co-enzyme A carboxylase
carboxyltransferase alpha subunit
Length = 769
Score = 29.1 bits (62), Expect = 4.0
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +2
Query: 275 EEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAINVAEKNNAEIEKIKAELHAI 454
EE + + ++ S+E H L P+L EK+E L N + E +K++L+ +
Sbjct: 488 EERLTAMREEFSKASSEEH----LMHPVLIEKIEKLKEEFNTRLTDAPNYESLKSKLNML 543
Query: 455 S--QQLASEIEAHKVTKENLKRLNEMLRR 535
+ + EA + KE KR E + R
Sbjct: 544 RDFSRAKAASEATSLKKEINKRFQEAVDR 572
>At5g59390.1 68418.m07442 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 561
Score = 28.7 bits (61), Expect = 5.3
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 347 EVPMLQEKVESLTSAINVAEKNNAEIEKIK-AELHAISQQLASEIEAHKVTKENLKRLNE 523
E M + ++E + + E+N A E +K AE H S L + + HK E +LNE
Sbjct: 269 EEEMEKSRLEREMNQKAMCEQNEANEEAMKLAEKHQASSSLKEKEKLHKRIMEMEAKLNE 328
Query: 524 MLRRKMS*VLKWETTKGPLKELTSKMEGNREKV 622
++ + K + T +K + +G+++ V
Sbjct: 329 TQELELE-IEKLKGTTNVMKHMVGS-DGDKDIV 359
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12)
/ HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 28.7 bits (61), Expect = 5.3
Identities = 25/97 (25%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Frame = +2
Query: 266 QKTEEDKVRLEKLINENSAEVHKNGKLEVPM---LQEKVESLTSAINVAEKNNAEIEKIK 436
++ E++++ +LI E+ + K++V LQ + ++ A ++EK
Sbjct: 32 KRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEY 91
Query: 437 AELHAISQQLASEIEAHKVTKEN----LKRLNEMLRR 535
L A LAS+ E K K++ L+RLNE ++R
Sbjct: 92 NTLRANYNNLASQFEIMKKEKQSLVSELQRLNEEMQR 128
>At4g18240.1 68417.m02709 starch synthase-related protein contains
similarity to starch synthase GI:4582783 from [Vigna
unguiculata]
Length = 1040
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +3
Query: 3 ERDSAIKMLEEKDIIIISLKDEIEKLKHQSLNSSEVPNEDNMSTSTMSKADETARMRDL 179
E D IK ++ + L++++EKL+H+ ++ P E + +SK ET ++ +L
Sbjct: 236 ETDERIKTAAQEKAHVELLEEQLEKLRHEMIS----PIESDGYVLALSKELETLKLENL 290
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +2
Query: 266 QKTE-EDKVRLEKLINENSAEVHKNGKLEVPMLQEKVE----SLTSAINVAEKNNAEIEK 430
Q+TE +DK+ +++ E K + ++ L+E++E SL + K ++ +
Sbjct: 625 QETEIQDKIEALSVVSARELEKVKGYETKISSLREELELARESLKEMKDEKRKTEEKLSE 684
Query: 431 IKAELHAISQQLAS 472
KAE + +QL S
Sbjct: 685 TKAEKETLKKQLVS 698
>At1g56440.1 68414.m06491 serine/threonine protein
phosphatase-related similar to SP|Q60676
Serine/threonine protein phosphatase 5 (EC 3.1.3.16)
(PP5) (Protein phosphatase T) (PPT) Mus musculus,
Tetratricopeptide Repeats Of Protein Phosphatase 5 [Homo
sapiens] GI:3212250; contains Pfam profile: PF00515: TPR
Domain
Length = 476
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 51 ISLKDEIEKLKHQSLNSSEVPNEDNMSTSTMSKADETARMRDL 179
+SLKD+ +K+K Q NSS P+ + S K D + R +
Sbjct: 28 LSLKDKDKKIKQQPANSSN-PSSETFRPSGSGKYDFAKKYRSI 69
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 272 TEEDKVRLEKLINENSAEVHKNGKLEVPMLQEKVESLTSAIN 397
T+EDK ++EK I+E + N EV + K++ L N
Sbjct: 568 TQEDKQKIEKAIDETIEWIEGNQLAEVDEFEYKLKELEGICN 609
>At5g51330.1 68418.m06364 meiosis protein-related (DYAD) (SWI1)
annotation temporarily based on supporting cDNA
gi|18483289|gb|AF466153.1|; supporting cDNA are SWITCH1
splice variant S and SWITCH1 splice variant L (SWI1)
GI:16033413 and GI:16033410
Length = 639
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Frame = +2
Query: 263 LQKTEEDKVRLEKLINENSAEVHKNGKLEVPMLQE---KVESLTSAINVAEKNN 415
L+K EED L+K ++EN + K E P+L E +++L + V K N
Sbjct: 488 LRKMEEDMGWLKKTVDENYPK--KPDSTETPLLLEDSPPIQTLEGEVKVVNKGN 539
>At5g07980.1 68418.m00928 dentin sialophosphoprotein-related contains
weak similarity to Swiss-Prot:Q9NZW4 dentin
sialophosphoprotein precursor [Homo sapiens]
Length = 1501
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +1
Query: 703 IIPEETPKQGPERGTFSKP---LRAPTXRWWGSGLGPPSLLRP 822
++ +P+Q G S P + AP R+W L +LRP
Sbjct: 970 LVASSSPQQNSSSGMMSDPPAGISAPQLRFWNQPLPQSDILRP 1012
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,536,532
Number of Sequences: 28952
Number of extensions: 276620
Number of successful extensions: 987
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 986
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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