Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40014
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    29   0.047
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.047
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    29   0.047
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           28   0.082
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.76 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   9.4  

>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 0.047
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 149 EKRDIVARPQEQIRSIF---FFRCYKHKKLEAC 238
           E RD+V RP  ++R  F    F+C K K +  C
Sbjct: 132 EMRDLVTRPSYRLRKFFDELLFKCMKEKWIPLC 164


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.047
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 149 EKRDIVARPQEQIRSIF---FFRCYKHKKLEAC 238
           E RD+V RP  ++R  F    F+C K K +  C
Sbjct: 365 EMRDLVTRPSYRLRKFFDELLFKCMKEKWIPLC 397


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 0.047
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
 Frame = +2

Query: 149 EKRDIVARPQEQIRSIF---FFRCYKHKKLEAC 238
           E RD+V RP  ++R  F    F+C K K +  C
Sbjct: 365 EMRDLVTRPSYRLRKFFDELLFKCMKEKWIPLC 397


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 28.3 bits (60), Expect = 0.082
 Identities = 12/54 (22%), Positives = 30/54 (55%)
 Frame = +2

Query: 203 FRCYKHKKLEACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSEIRASK 364
           +   +H   ++ I+   + T P  T+  ++RP++  P + ++L T+ S++R  +
Sbjct: 19  YNVIQHSPQQSIIVSGSI-TQPTKTVIQSKRPLAPAPERTSVLVTNNSDLRCKR 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
 Frame = +2

Query: 107 GLQFCQKFSQCVP-EEKRDIVARPQ 178
           G+ +C K  +CVP ++KR IVAR Q
Sbjct: 58  GVLYCMK-CECVPLQKKRRIVARVQ 81


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 307 KRNRASRGRKRIPWRSVHDVLHDAR 233
           K+N +S+ + R  +RSV DV+   +
Sbjct: 230 KKNDSSKKKTRYYYRSVDDVIEKGK 254


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/36 (25%), Positives = 16/36 (44%)
 Frame = +2

Query: 53  ARIGSLPVSDELKGDIQEGLQFCQKFSQCVPEEKRD 160
           A  G + + D  K + Q+ +  C K  +  PE   +
Sbjct: 287 AMCGLVLICDSAKSESQQTVFLCYKLMEKFPERSHE 322


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,452
Number of Sequences: 336
Number of extensions: 3215
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)