Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40014
         (853 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021441-1|AAX33589.1|  491|Drosophila melanogaster GH03493p pro...    29   6.1  
AE014134-3080|AAN11036.1|  491|Drosophila melanogaster CG31798-P...    29   6.1  
Y00843-1|CAA68766.1|  410|Drosophila melanogaster protein ( Dros...    29   8.1  
BT025227-1|ABF17918.1|  418|Drosophila melanogaster FI01011p pro...    29   8.1  
AY119136-1|AAM50996.1|  418|Drosophila melanogaster RE37758p pro...    29   8.1  
AE014134-1019|AAF52323.2|  418|Drosophila melanogaster CG11607-P...    29   8.1  

>BT021441-1|AAX33589.1|  491|Drosophila melanogaster GH03493p
           protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 206 RCYKHKKLEACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSEIRASKPWRKWRC 385
           +CY+H K       D+ +    N L        +TP+  A+L +S +   A    R+W+ 
Sbjct: 378 KCYEHAKRIYVDFNDLHSRKMANYLQAKLMADEITPLYMAMLKSSTTRYCAFFNLRQWKN 437

Query: 386 TC 391
            C
Sbjct: 438 RC 439


>AE014134-3080|AAN11036.1|  491|Drosophila melanogaster CG31798-PA
           protein.
          Length = 491

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +2

Query: 206 RCYKHKKLEACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSEIRASKPWRKWRC 385
           +CY+H K       D+ +    N L        +TP+  A+L +S +   A    R+W+ 
Sbjct: 378 KCYEHAKRIYVDFNDLHSRKMANYLQAKLMADEITPLYMAMLKSSTTRYCAFFNLRQWKN 437

Query: 386 TC 391
            C
Sbjct: 438 RC 439


>Y00843-1|CAA68766.1|  410|Drosophila melanogaster protein (
           Drosophila melanogasterH2.0 homeobox gene. ).
          Length = 410

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 230 EACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSE 349
           E+C    I++TSP +  STT+  +S +   D LL + P E
Sbjct: 40  ESCASTTIVSTSPTSATSTTKVKLSFS--VDRLLGSEPEE 77


>BT025227-1|ABF17918.1|  418|Drosophila melanogaster FI01011p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 230 EACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSE 349
           E+C    I++TSP +  STT+  +S +   D LL + P E
Sbjct: 49  ESCASTTIVSTSPTSATSTTKVKLSFS--VDRLLGSEPEE 86


>AY119136-1|AAM50996.1|  418|Drosophila melanogaster RE37758p
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 230 EACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSE 349
           E+C    I++TSP +  STT+  +S +   D LL + P E
Sbjct: 49  ESCASTTIVSTSPTSATSTTKVKLSFS--VDRLLGSEPEE 86


>AE014134-1019|AAF52323.2|  418|Drosophila melanogaster CG11607-PA
           protein.
          Length = 418

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +2

Query: 230 EACIMKDIMNTSPRNTLSTTRRPISLTPVQDALLATSPSE 349
           E+C    I++TSP +  STT+  +S +   D LL + P E
Sbjct: 49  ESCASTTIVSTSPTSATSTTKVKLSFS--VDRLLGSEPEE 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,677,116
Number of Sequences: 53049
Number of extensions: 615902
Number of successful extensions: 1539
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1535
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)