Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40012
(706 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q15543 Cluster: Transcription initiation factor TFIID s... 152 9e-36
UniRef50_Q54CN8 Cluster: Transcription initiation factor TFIID s... 103 3e-21
UniRef50_Q5DA54 Cluster: SJCHGC03580 protein; n=1; Schistosoma j... 101 2e-20
UniRef50_Q6NQH4 Cluster: At1g02680; n=1; Arabidopsis thaliana|Re... 101 2e-20
UniRef50_Q17957 Cluster: Putative uncharacterized protein taf-13... 99 9e-20
UniRef50_Q018Q2 Cluster: Histone acetyltransferase PCAF/SAGA, su... 98 2e-19
UniRef50_A2WPH2 Cluster: Putative uncharacterized protein; n=1; ... 97 5e-19
UniRef50_Q5Z8E9 Cluster: Putative TAF13; n=1; Oryza sativa (japo... 80 6e-14
UniRef50_Q6C9N9 Cluster: Similar to sp|P11747 Saccharomyces cere... 73 5e-12
UniRef50_Q1DRD0 Cluster: Putative uncharacterized protein; n=1; ... 71 4e-11
UniRef50_Q0UTQ7 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_Q4WTG8 Cluster: Transcription initiation factor TFIID s... 62 1e-08
UniRef50_Q8SS37 Cluster: TRANSCRIPTION INITIATION FACTOR TFIID; ... 62 1e-08
UniRef50_UPI0000D99AAF Cluster: PREDICTED: similar to TATA box-b... 60 7e-08
UniRef50_Q5A5A6 Cluster: Putative uncharacterized protein TAF13;... 59 1e-07
UniRef50_O60076 Cluster: Transcription factor TFIID complex subu... 58 2e-07
UniRef50_Q6CRC3 Cluster: Similarities with sp|P11747 Saccharomyc... 58 3e-07
UniRef50_Q8WZU2 Cluster: Related to TFIID subunit TAF19; n=3; So... 52 1e-05
UniRef50_A7TR30 Cluster: Putative uncharacterized protein; n=1; ... 52 2e-05
UniRef50_A5DGS4 Cluster: Putative uncharacterized protein; n=1; ... 51 2e-05
UniRef50_A7SRX1 Cluster: Predicted protein; n=1; Nematostella ve... 49 1e-04
UniRef50_P11747 Cluster: Transcription initiation factor TFIID s... 48 3e-04
UniRef50_O75486 Cluster: Transcription initiation protein SPT3 h... 46 0.001
UniRef50_Q5KD61 Cluster: Transcription cofactor, putative; n=1; ... 44 0.005
UniRef50_O14311 Cluster: Protein spt3; n=1; Schizosaccharomyces ... 44 0.005
UniRef50_UPI00015B4490 Cluster: PREDICTED: similar to suppressor... 43 0.008
UniRef50_UPI000049884D Cluster: hypothetical protein 117.t00037;... 42 0.020
UniRef50_Q6MY90 Cluster: Transcription factor spt3, putative; n=... 41 0.034
UniRef50_Q9KUM3 Cluster: Putative uncharacterized protein; n=4; ... 38 0.24
UniRef50_Q98RT7 Cluster: Putative uncharacterized protein orf168... 36 0.73
UniRef50_Q5K8P7 Cluster: Expressed protein; n=2; Filobasidiella ... 36 0.73
UniRef50_A6QX48 Cluster: Predicted protein; n=1; Ajellomyces cap... 36 0.97
UniRef50_Q4PIE9 Cluster: Putative uncharacterized protein; n=1; ... 35 2.2
UniRef50_A6RT44 Cluster: Putative uncharacterized protein; n=2; ... 35 2.2
UniRef50_P06844 Cluster: Protein SPT3; n=11; Saccharomycetales|R... 35 2.2
UniRef50_Q5DF94 Cluster: SJCHGC09489 protein; n=1; Schistosoma j... 34 3.0
UniRef50_A6DFE0 Cluster: Glutamate synthase large subunit; n=1; ... 34 3.9
UniRef50_Q4PH99 Cluster: Putative uncharacterized protein; n=1; ... 34 3.9
UniRef50_A0DWL8 Cluster: Chromosome undetermined scaffold_67, wh... 33 5.2
UniRef50_A2D9Z1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.8
UniRef50_UPI0000DA3271 Cluster: PREDICTED: similar to suppressor... 33 9.0
UniRef50_Q3ZYH4 Cluster: Sensor protein; n=3; Dehalococcoides|Re... 33 9.0
UniRef50_Q17MY7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
UniRef50_P91055 Cluster: Putative uncharacterized protein; n=1; ... 33 9.0
>UniRef50_Q15543 Cluster: Transcription initiation factor TFIID
subunit 13 (Transcription initiation factor TFIID 18 kDa
subunit) (TAF(II)18); n=36; Eumetazoa|Rep: Transcription
initiation factor TFIID subunit 13 (Transcription
initiation factor TFIID 18 kDa subunit) (TAF(II)18) -
Homo sapiens (Human)
Length = 124
Score = 152 bits (368), Expect = 9e-36
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDDQNPYTESVD LEDLVIEFITE TH+AM +GR GRVQVEDI+FL+RKD RK+ARV
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARV 100
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
KDLLTMNEELK+ARKAFDE Y
Sbjct: 101 KDLLTMNEELKRARKAFDEANY 122
>UniRef50_Q54CN8 Cluster: Transcription initiation factor TFIID
subunit; n=1; Dictyostelium discoideum AX4|Rep:
Transcription initiation factor TFIID subunit -
Dictyostelium discoideum AX4
Length = 106
Score = 103 bits (248), Expect = 3e-21
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 1/89 (1%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGRVQVEDIIFLVRKDARKYAR 431
YGFGD + P ES+D LE+LV EFI E T +A +V + G+ Q ED++FLVRKD +KY R
Sbjct: 18 YGFGDVREPLHESIDLLEELVFEFIQEMTLKAAQVSNKRGKFQTEDLVFLVRKDPKKYYR 77
Query: 432 VKDLLTMNEELKKARKAFDEVKYVEDNSN 518
V +LL MNEELKKA+KAFDE VE+ N
Sbjct: 78 VIELLRMNEELKKAKKAFDETN-VEEEEN 105
>UniRef50_Q5DA54 Cluster: SJCHGC03580 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03580 protein - Schistosoma
japonicum (Blood fluke)
Length = 130
Score = 101 bits (242), Expect = 2e-20
Identities = 41/82 (50%), Positives = 65/82 (79%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
Y FGDD+NP E+V +ED+ + I E T +A++VGR G++ VED+ +LVR+D +K++RV
Sbjct: 45 YAFGDDENPLPETVSLVEDITVRHILEMTKKALKVGRPGKISVEDVTYLVRRDPKKFSRV 104
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
K+LL ++EEL++ARKAF+E ++
Sbjct: 105 KELLLLSEELRRARKAFEEDEF 126
>UniRef50_Q6NQH4 Cluster: At1g02680; n=1; Arabidopsis thaliana|Rep:
At1g02680 - Arabidopsis thaliana (Mouse-ear cress)
Length = 126
Score = 101 bits (241), Expect = 2e-20
Identities = 44/79 (55%), Positives = 62/79 (78%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGRVQVEDIIFLVRKDARKYAR 431
YGFGD+QNP ESV +ED+V+E++T+ TH+A E+G + GR+ V+D ++L+RKD K R
Sbjct: 40 YGFGDEQNPLPESVALVEDIVVEYVTDLTHKAQEIGSKRGRLLVDDFLYLIRKDLPKLNR 99
Query: 432 VKDLLTMNEELKKARKAFD 488
++LL M EELK+ARKAFD
Sbjct: 100 CRELLAMQEELKQARKAFD 118
>UniRef50_Q17957 Cluster: Putative uncharacterized protein taf-13;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein taf-13 - Caenorhabditis elegans
Length = 121
Score = 99.1 bits (236), Expect = 9e-20
Identities = 42/81 (51%), Positives = 65/81 (80%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDD+ PY +++D LE +V+ +I E AM+VG+ ++ +EDI +L+R+D +K++RV
Sbjct: 38 YGFGDDKEPYDKTLDTLEAIVLNYIKELCQLAMKVGKPDKMALEDIHYLIRRDPKKFSRV 97
Query: 435 KDLLTMNEELKKARKAFDEVK 497
KDLL+M+EELKKARK F+++K
Sbjct: 98 KDLLSMSEELKKARKQFEDMK 118
>UniRef50_Q018Q2 Cluster: Histone acetyltransferase PCAF/SAGA,
subunit SUPT3H/SPT3; n=2; Ostreococcus|Rep: Histone
acetyltransferase PCAF/SAGA, subunit SUPT3H/SPT3 -
Ostreococcus tauri
Length = 161
Score = 97.9 bits (233), Expect = 2e-19
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
Frame = +3
Query: 207 YIRS*KTF**GIAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGRVQV 383
++R TF ++ YGFGD + P ESV+ +ED+++E++T HRAMEV R GR+Q
Sbjct: 39 FVRRKGTFAKDLSYMMYGFGDAKEPDPESVELMEDMLVEYLTNVAHRAMEVAERRGRMQT 98
Query: 384 EDIIFLVRKDARKYARVKDLLTMNEELKKARKAFD 488
ED+++++R D +K+ARV +LL MN +LK ARK FD
Sbjct: 99 EDLLYVIRNDRKKFARVDELLEMNAKLKDARKNFD 133
>UniRef50_A2WPH2 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 161
Score = 96.7 bits (230), Expect = 5e-19
Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGRVQVEDIIFLVRKDARKYAR 431
YGFGDD NP E+V +ED+V+E++T+ H+A V + G++ ED ++L+RKD RK R
Sbjct: 72 YGFGDDPNPLPETVALVEDIVVEYVTDLVHKAQNVASKRGKLLTEDFLYLIRKDVRKLHR 131
Query: 432 VKDLLTMNEELKKARKAFD 488
+LL+MNEELK+ARKAFD
Sbjct: 132 ATELLSMNEELKQARKAFD 150
>UniRef50_Q5Z8E9 Cluster: Putative TAF13; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Putative TAF13 - Oryza
sativa subsp. japonica (Rice)
Length = 183
Score = 79.8 bits (188), Expect = 6e-14
Identities = 35/71 (49%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +3
Query: 279 PYTESVDFLEDLVIEFITETTHRAMEVG-RTGRVQVEDIIFLVRKDARKYARVKDLLTMN 455
P E+V +ED+V+E++T+ H+A V + G++ ED ++L+RKD RK R +LL+MN
Sbjct: 102 PLPETVALVEDIVVEYVTDLVHKAQNVASKRGKLLTEDFLYLIRKDVRKLHRATELLSMN 161
Query: 456 EELKKARKAFD 488
EELK+ARKAFD
Sbjct: 162 EELKQARKAFD 172
>UniRef50_Q6C9N9 Cluster: Similar to sp|P11747 Saccharomyces
cerevisiae YML098w FUN81 TFIID subunit; n=1; Yarrowia
lipolytica|Rep: Similar to sp|P11747 Saccharomyces
cerevisiae YML098w FUN81 TFIID subunit - Yarrowia
lipolytica (Candida lipolytica)
Length = 150
Score = 73.3 bits (172), Expect = 5e-12
Identities = 34/84 (40%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAM---EVGRTGRVQVEDIIFLVRKDARKY 425
Y FGD +PY E+V LED++ ++I +T H A E+ +++V+D FL+R D RK
Sbjct: 24 YAFGDVNDPYPETVAALEDILTDYIVDTCHEAAKMAEIAGRQKIKVDDFKFLLRNDPRKL 83
Query: 426 ARVKDLLTMNEELKKARKAFDEVK 497
R ++LL + +E +ARKAFD +
Sbjct: 84 GRAEELLVLQKEFVEARKAFDSTE 107
>UniRef50_Q1DRD0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 269
Score = 70.5 bits (165), Expect = 4e-11
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Frame = +3
Query: 273 QNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGR--VQVEDIIFLVRKDARKYARVKDL 443
Q P E+V L+++V +FI ET H A +V GR V+V+D +F++R+DA K RV++L
Sbjct: 119 QEPNPETVRVLDEIVTDFIIETCHAAAQVAAHAGRQKVKVDDFMFVIRRDAAKLGRVQEL 178
Query: 444 LTMNEELKKARKAFDE 491
+ +ELK+ARKAFD+
Sbjct: 179 FQLEKELKEARKAFDQ 194
>UniRef50_Q0UTQ7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 224
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
Frame = +3
Query: 261 FGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG---RTGRVQVEDIIFLVRKDARKYAR 431
FGD+ P E+V L++++ ++I ET H A V R +++++D F++R+D K R
Sbjct: 84 FGDNDYPLPETVRVLDEIITDYIIETCHEAASVAHHARRAKIKLDDFKFMLRRDTVKLGR 143
Query: 432 VKDLLTMNEELKKARKAFD 488
V D+L ++ELK+ RKAFD
Sbjct: 144 VSDMLETDKELKRKRKAFD 162
>UniRef50_Q4WTG8 Cluster: Transcription initiation factor TFIID
subunit 13, putative; n=6; Trichocomaceae|Rep:
Transcription initiation factor TFIID subunit 13,
putative - Aspergillus fumigatus (Sartorya fumigata)
Length = 298
Score = 62.5 bits (145), Expect = 1e-08
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +3
Query: 279 PYTESVDFLEDLVIEFITETTHRAMEVG---RTGRVQVEDIIFLVRKDARKYARVKDLLT 449
P E+V L+++V +F+ E H A + R +++V+D F +R+D K RV++LL
Sbjct: 169 PLPETVRVLDEIVTDFVLEMCHNAAQYASYSRRQKIKVDDFRFALRRDPNKLGRVQELLR 228
Query: 450 MNEELKKARKAFDE 491
M ELK+ARKAFD+
Sbjct: 229 MERELKEARKAFDQ 242
>UniRef50_Q8SS37 Cluster: TRANSCRIPTION INITIATION FACTOR TFIID;
n=1; Encephalitozoon cuniculi|Rep: TRANSCRIPTION
INITIATION FACTOR TFIID - Encephalitozoon cuniculi
Length = 103
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/88 (32%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFIT---ETTHRAMEVGRTGRVQVEDIIFLVRKDARKY 425
YG+GD P ++ + L V+++++ TH +V G+ + ED+++ +++D +KY
Sbjct: 18 YGYGDVVAPRYDTAEALHGYVLDYMSILLTNTHNMAQV--KGKTKTEDLLYYLKRDRKKY 75
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
+RV+ LL NEE+K A+KAF+ Y ++
Sbjct: 76 SRVRHLLITNEEIKLAKKAFEPKDYEKE 103
>UniRef50_UPI0000D99AAF Cluster: PREDICTED: similar to TATA
box-binding protein-associated factor, RNA polymerase
II, K, 18kD; n=1; Macaca mulatta|Rep: PREDICTED: similar
to TATA box-binding protein-associated factor, RNA
polymerase II, K, 18kD - Macaca mulatta
Length = 81
Score = 59.7 bits (138), Expect = 7e-08
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITE 335
YGFGDDQNPYTESVD LEDLVIEFITE
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITE 67
>UniRef50_Q5A5A6 Cluster: Putative uncharacterized protein TAF13;
n=1; Candida albicans|Rep: Putative uncharacterized
protein TAF13 - Candida albicans (Yeast)
Length = 166
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRT---GRVQVEDIIFLVRKDARKY 425
Y GD +V+ LED+++E+I++ ++ + ++ RV++ D+ F +R D K
Sbjct: 34 YAMGDRPVSTEATVNALEDVLVEYISQISYSMVNFAKSQNRTRVKLNDLAFTLRNDPMKL 93
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVEDNSNH 521
AR + +L + +++KA+K FD+ KY DN NH
Sbjct: 94 ARFRYILEQSYKIEKAKKMFDDDKY--DNKNH 123
>UniRef50_O60076 Cluster: Transcription factor TFIID complex subunit
Taf13; n=1; Schizosaccharomyces pombe|Rep: Transcription
factor TFIID complex subunit Taf13 - Schizosaccharomyces
pombe (Fission yeast)
Length = 132
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEV-GRTGRVQVEDIIFLVRKDARKYAR 431
Y FGDD NP +S++ LE++V+++I E A + G +V+V+D F +R D +K R
Sbjct: 27 YAFGDDVNPAPDSINVLEEIVVDYINEMCLEAARIAGNRNKVKVDDFKFALRDDPKKLGR 86
Query: 432 VKDLL 446
V++LL
Sbjct: 87 VEELL 91
>UniRef50_Q6CRC3 Cluster: Similarities with sp|P11747 Saccharomyces
cerevisiae YML098w FUN81 TFIID subunit; n=1;
Kluyveromyces lactis|Rep: Similarities with sp|P11747
Saccharomyces cerevisiae YML098w FUN81 TFIID subunit -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 159
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRT---GRVQVEDIIFLVRKDARKY 425
Y FGD P E++ +++LV+ ++++ A +T +++VED F++RKD K
Sbjct: 20 YAFGDVAQPLPETIQCVDELVVSYLSDICANAYYSAQTVKRNKIKVEDFRFVLRKDEVKL 79
Query: 426 ARVKDLLTMNEELKKARKAFD 488
R ++L+ MN+ + ARK FD
Sbjct: 80 GRAEELIKMNKVITDARKQFD 100
>UniRef50_Q8WZU2 Cluster: Related to TFIID subunit TAF19; n=3;
Sordariomycetes|Rep: Related to TFIID subunit TAF19 -
Neurospora crassa
Length = 215
Score = 52.4 bits (120), Expect = 1e-05
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 4/87 (4%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFIT----ETTHRAMEVGRTGRVQVEDIIFLVR 407
+A YG GD +NP E+V L++L+ +FI E T A GR +V+ ED F +R
Sbjct: 21 LAQLLYGHGDLKNPLPETVRVLDELITDFIQGVGFEATRAAHHAGRQ-KVKFEDFEFAMR 79
Query: 408 KDARKYARVKDLLTMNEELKKARKAFD 488
++ R +++++ +E++ ARK F+
Sbjct: 80 RNPRFMGKIQEVFEKKKEIEAARKNFN 106
>UniRef50_A7TR30 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 189
Score = 51.6 bits (118), Expect = 2e-05
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGR---TGRVQVEDIIFLVRKDARKY 425
Y +GD +P ++V L++++ ++ + H+A +V + +V++ED F+++ D K
Sbjct: 20 YAYGDVASPLPQTVTCLDEVISSYLVDICHKAYKVSKYSNRSKVKLEDFKFVLKNDPIKL 79
Query: 426 ARVKDLLTMNEELKKARKAFDE 491
R +L+ N+ + +A+K F+E
Sbjct: 80 GRADELIATNKLITEAKKQFNE 101
>UniRef50_A5DGS4 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 186
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRT---GRVQVEDIIFLVRKDARKY 425
Y GD P E+ + L+D + E++ + + + R RV+++D F +R D K
Sbjct: 63 YALGDGPYPSEETANALDDTLTEYLGDLCYATQQYARAHGRNRVKMDDFPFALRNDPLKE 122
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVEDNSN 518
AR + ++ +++++ RK +D YV++ N
Sbjct: 123 ARFEHIIKQKQKIERDRKMYDHDTYVKEMEN 153
>UniRef50_A7SRX1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 273
Score = 49.2 bits (112), Expect = 1e-04
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG--RTGR-VQVEDIIFLVRKDARKY 425
Y FGD + P ES +E++V + I RA EV R GR + +EDIIFL+R+D K
Sbjct: 2 YAFGDCRRPSPESAAIIEEIVHQQIASLIVRAAEVTNMRGGRFMSIEDIIFLMRRDKDKL 61
Query: 426 ARVKDLLTMNEELKKARKAFDEVK-YVEDNSNHT 524
R+ L+ + K +K + + V DN+ T
Sbjct: 62 KRLIKYLSFKDMKSKTQKQVSQDEDDVLDNAGTT 95
>UniRef50_P11747 Cluster: Transcription initiation factor TFIID
subunit 13; n=4; Saccharomycetales|Rep: Transcription
initiation factor TFIID subunit 13 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 167
Score = 47.6 bits (108), Expect = 3e-04
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG---RVQVEDIIFLVRKDARKY 425
Y +GD P +V L++LV ++ + A + ++++ED F +RKD K
Sbjct: 20 YAYGDVPQPLQATVQCLDELVSGYLVDVCTNAFHTAQNSQRNKLRLEDFKFALRKDPIKL 79
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVEDNSN 518
R ++L+ N+ + +A+K F+E DN N
Sbjct: 80 GRAEELIATNKLITEAKKQFNET----DNQN 106
>UniRef50_O75486 Cluster: Transcription initiation protein SPT3
homolog; n=34; Euteleostomi|Rep: Transcription
initiation protein SPT3 homolog - Homo sapiens (Human)
Length = 399
Score = 46.0 bits (104), Expect = 0.001
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 117 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 176
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 177 RRLLKYMFIRDYKSKIVKGIDEDDLLED 204
>UniRef50_Q5KD61 Cluster: Transcription cofactor, putative; n=1;
Filobasidiella neoformans|Rep: Transcription cofactor,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 413
Score = 43.6 bits (98), Expect = 0.005
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +3
Query: 261 FGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG--RTGR-VQVEDIIFLVRKDARKYAR 431
FG+ Q P E+V +ED+V I E RA + R+ R + ED+IFL+R D K R
Sbjct: 91 FGEVQTPLPETVKLVEDIVRGQIIEIVTRARLLTHLRSSRFLSAEDLIFLIRDDRGKVNR 150
Query: 432 VKDLLTMNEELKKARK 479
++ L+ + K+A++
Sbjct: 151 LRTYLSWKDVRKRAKE 166
>UniRef50_O14311 Cluster: Protein spt3; n=1; Schizosaccharomyces
pombe|Rep: Protein spt3 - Schizosaccharomyces pombe
(Fission yeast)
Length = 307
Score = 43.6 bits (98), Expect = 0.005
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 264 GDDQNPYTESVDFLEDLVIEFITETTHRAMEVG-RTGR--VQVEDIIFLVRKDARKYARV 434
G+ Q+P E+ +E+L+ + E +A E+ R G + VED+ FL+R D K R+
Sbjct: 22 GEVQDPLPETTQLVEELIRGQVMEMLIQANELALRRGSRSITVEDLFFLIRHDRAKVNRL 81
Query: 435 KDLLTMNEELKKARK 479
K L+ E KKA++
Sbjct: 82 KTYLSWKEVRKKAKE 96
>UniRef50_UPI00015B4490 Cluster: PREDICTED: similar to suppressor of
Ty 3 homolog (S. cerevisiae); n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to suppressor of Ty
3 homolog (S. cerevisiae) - Nasonia vitripennis
Length = 312
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
+GFGD P E+ +E++V+ + +A EV QV ED +FL+RKD K
Sbjct: 34 HGFGDHSEPLIETAKIIEEVVLNQMRAIIRKACEVADMRESQVVSAEDFLFLLRKDKIKL 93
Query: 426 ARVKDLLTMNE 458
R+ + L + +
Sbjct: 94 QRLVNYLKLKD 104
>UniRef50_UPI000049884D Cluster: hypothetical protein 117.t00037;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 117.t00037 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 41.5 bits (93), Expect = 0.020
Identities = 25/76 (32%), Positives = 45/76 (59%)
Frame = +3
Query: 270 DQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLT 449
D+N E+V+ +E L+IEFI E T + + T +++ ED++ + +D RK+ R +L
Sbjct: 38 DENCMDETVELIEQLLIEFILEFTLKIRQDEPTKQIKPEDVLIHLIRDRRKFDRGAYILC 97
Query: 450 MNEELKKARKAFDEVK 497
+E+K R +E+K
Sbjct: 98 --QEIKTNRYK-EEIK 110
>UniRef50_Q6MY90 Cluster: Transcription factor spt3, putative; n=15;
Pezizomycotina|Rep: Transcription factor spt3, putative
- Aspergillus fumigatus (Sartorya fumigata)
Length = 362
Score = 40.7 bits (91), Expect = 0.034
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = +3
Query: 264 GDDQNPYTESVDFLEDLVIEFITETTHRA-MEVGRTG--RVQVEDIIFLVRKDARKYARV 434
G+ P E+ +ED+V + + E R+ M R G + +D+IFL+R D K +R+
Sbjct: 6 GETAEPSVETTTLIEDIVRQQVIEILARSTMLATRRGVRSISTDDLIFLIRHDKAKVSRL 65
Query: 435 KDLLTMNEELKKARKAFDE 491
K L+ + K + + D+
Sbjct: 66 KTFLSWKDVRKNVKDSDDK 84
>UniRef50_Q9KUM3 Cluster: Putative uncharacterized protein; n=4;
Vibrio cholerae|Rep: Putative uncharacterized protein -
Vibrio cholerae
Length = 388
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/66 (27%), Positives = 40/66 (60%)
Frame = +3
Query: 333 ETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMNEELKKARKAFDEVKYVEDN 512
+T M++ +G + V++ IFL+ + R ++ V LL+ ++ ++A KAFDE+ + +
Sbjct: 75 KTLSNWMDLIDSGEIDVDNTIFLLFTNKRCHSEVLQLLSTSQATEEASKAFDEILKIVSH 134
Query: 513 SNHTVA 530
+ ++A
Sbjct: 135 PSPSIA 140
>UniRef50_Q98RT7 Cluster: Putative uncharacterized protein orf168;
n=1; Guillardia theta|Rep: Putative uncharacterized
protein orf168 - Guillardia theta (Cryptomonas phi)
Length = 168
Score = 36.3 bits (80), Expect = 0.73
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVG---RTGRVQVEDIIFLVRKDARKY 425
+GFGD+Q P + + +E V+ ++ + + + R + D+ FL+R K
Sbjct: 78 FGFGDNQFPIKKLISIMEKSVVRYVLKIVSLISYISYWRSSKRPSINDLFFLLRTKHSKL 137
Query: 426 ARVKDLLTM 452
R++ LL M
Sbjct: 138 MRIRYLLNM 146
>UniRef50_Q5K8P7 Cluster: Expressed protein; n=2; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 315
Score = 36.3 bits (80), Expect = 0.73
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITE 335
IA YG GD +P ++VD++ED+V+EF+++
Sbjct: 105 IAKLMYGAGDVADPDIDTVDYMEDMVVEFLSD 136
>UniRef50_A6QX48 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 173
Score = 35.9 bits (79), Expect = 0.97
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +3
Query: 273 QNPYTESVDFLEDLVIEFITETTHRAME---VGRTGRVQVEDIIFLVRKD 413
Q P E++ L+++V +FI ET H A + R +++V+D F +R+D
Sbjct: 121 QEPLPETLRVLDEIVTDFIIETCHSAAQCATYSRRQKIKVDDFRFALRRD 170
>UniRef50_Q4PIE9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 457
Score = 34.7 bits (76), Expect = 2.2
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLV----IEFITETTHRAMEVGRTGR-VQVEDIIFLV 404
IA + F D +P + +ED+V IE I ++ R + R + + ED+IFL+
Sbjct: 36 IAQMMFVFADVVDPSPDVTRLIEDIVRSQTIEMIIQS--RRLSQRRASKYLSPEDLIFLI 93
Query: 405 RKDARKYARVKDLLTMNEELKKARKAFD 488
R D K R++ L+ + K A+ + D
Sbjct: 94 RYDRAKVNRLRTYLSWKDVRKNAKDSGD 121
>UniRef50_A6RT44 Cluster: Putative uncharacterized protein; n=2;
Sclerotiniaceae|Rep: Putative uncharacterized protein -
Botryotinia fuckeliana B05.10
Length = 146
Score = 34.7 bits (76), Expect = 2.2
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITET---THRAMEVGRTGRVQVEDIIFLVRKDARKY 425
+ GD + + L+++V +FI E RA ++ +V+++DI F RK+
Sbjct: 27 HAHGDVHHALETTTKTLDEIVTDFIIELCFEASRAAQIAGRQKVKLDDIKFACRKNPAFL 86
Query: 426 ARVKDLLTMNEELKKARKAFD 488
++ ++ + +A+K FD
Sbjct: 87 GKITEVFEKKMFIDEAKKTFD 107
>UniRef50_P06844 Cluster: Protein SPT3; n=11; Saccharomycetales|Rep:
Protein SPT3 - Saccharomyces cerevisiae (Baker's yeast)
Length = 337
Score = 34.7 bits (76), Expect = 2.2
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Frame = +3
Query: 264 GDDQNPYTESVDFLEDLV----IEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYAR 431
G+ +P E+ +ED+V IE + ++ A G + ED+IFL+R D K R
Sbjct: 19 GEINDPPVETTSLIEDIVRGQVIEILLQSNKTAHLRGSRS-ILPEDVIFLIRHDKAKVNR 77
Query: 432 VKDLLTMNEELKKAR 476
++ L+ + K A+
Sbjct: 78 LRTYLSWKDLRKNAK 92
>UniRef50_Q5DF94 Cluster: SJCHGC09489 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09489 protein - Schistosoma
japonicum (Blood fluke)
Length = 178
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/64 (26%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +3
Query: 321 EFITETTHRAMEVGRTGRVQ--VEDIIFLVRKDARKYARVKDLLTMNEELKKARKAFDEV 494
+FI HRA R G++ +ED ++ D+ A++ ++ + ++ + ARK+F+
Sbjct: 96 DFIPAKKHRAYVKVRMGKLTEAIEDYESVLNHDSGSNAKINEIRELQDQWENARKSFENS 155
Query: 495 KYVE 506
+Y E
Sbjct: 156 EYKE 159
>UniRef50_A6DFE0 Cluster: Glutamate synthase large subunit; n=1;
Lentisphaera araneosa HTCC2155|Rep: Glutamate synthase
large subunit - Lentisphaera araneosa HTCC2155
Length = 2482
Score = 33.9 bits (74), Expect = 3.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 249 YDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDII 395
YDY GD N + + L D +IE + E + +++G+ G+V D +
Sbjct: 2149 YDYKAGDALNVIPVNEESLVDDIIEVLAEDPEKILDLGKDGKVSFRDAL 2197
>UniRef50_Q4PH99 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 415
Score = 33.9 bits (74), Expect = 3.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRA 350
Y +GD NP +SV +E++ ++FIT+ RA
Sbjct: 209 YAYGDSPNPDPDSVMLMEEMTVDFITDLCCRA 240
>UniRef50_A0DWL8 Cluster: Chromosome undetermined scaffold_67, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_67,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 859
Score = 33.5 bits (73), Expect = 5.2
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +3
Query: 288 ESVDFLEDLVIE--FITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMNEE 461
E+V+ LV+E F E T R++E+ + + ED++F++ +D +K+LL +N+
Sbjct: 378 ETVENAPVLVVETSFEIENTKRSIEISIS--IASEDLLFIIARDVIHRKNIKELLQINQS 435
Query: 462 LKK 470
K
Sbjct: 436 KSK 438
>UniRef50_A2D9Z1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 94
Score = 33.1 bits (72), Expect = 6.8
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRT-GRVQVEDIIFLVRKDARKY 425
Y ++ Y E+VD + + ++T+ T A++ ++ G++ +DI+ ++ D RKY
Sbjct: 16 YTCSGNKEQYNETVDTVLGALQVYLTQLTKTALQNSQSAGKISADDIMSALKSDRRKY 73
>UniRef50_UPI0000DA3271 Cluster: PREDICTED: similar to suppressor of
Ty 3 homolog; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to suppressor of Ty 3 homolog - Rattus
norvegicus
Length = 405
Score = 32.7 bits (71), Expect = 9.0
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Frame = +3
Query: 291 SVDFLEDLVIEFITETT---HRAMEVG--RTGRV-QVEDIIFLVRKDARKYARVKDLLTM 452
+++FL+ ++++ + +A EV R RV ED++FL+RKD +K R+ + +
Sbjct: 5 TLNFLQGSKLDYLVKIRMQLQQAAEVSQLRGARVISAEDLLFLMRKDKKKLRRLLKYMFI 64
Query: 453 NEELKKARKAFDEVKYVED 509
+ K K DE +E+
Sbjct: 65 RDYKSKIIKGIDEDDLLEE 83
>UniRef50_Q3ZYH4 Cluster: Sensor protein; n=3; Dehalococcoides|Rep:
Sensor protein - Dehalococcoides sp. (strain CBDB1)
Length = 394
Score = 32.7 bits (71), Expect = 9.0
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 276 NPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMN 455
+P T + F E L + +E HR +E T ++ ++ +R AR Y + K L +N
Sbjct: 156 SPLTSILGFSERLARKCTSEEQHRDIERIHTEALRAAKVVNNLRTFARSYEQEKKLCGLN 215
Query: 456 EELKKA 473
+ ++K+
Sbjct: 216 DVIRKS 221
>UniRef50_Q17MY7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 461
Score = 32.7 bits (71), Expect = 9.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 623 SPVPNWYYFYQVHLCFWYS 567
S W Y+Y +HLC+WY+
Sbjct: 350 STTTKWIYYYLLHLCYWYA 368
>UniRef50_P91055 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 592
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +3
Query: 402 VRKDARKYARVKDLLTMNEELKKARKAFDEVKYVEDNSNHTV 527
V+K+ ++ +KDLL + E ++K K DE + V++N N ++
Sbjct: 69 VKKELKQATSIKDLLEILEIIQKIFKKQDEFQQVQENQNKSI 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,697,404
Number of Sequences: 1657284
Number of extensions: 9202981
Number of successful extensions: 22296
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 21593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22277
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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