Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40012
(706 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X84003-1|CAA58827.1| 124|Homo sapiens PolII transcription facto... 152 1e-36
BX679664-8|CAH71330.1| 124|Homo sapiens TAF13 RNA polymerase II... 152 1e-36
BC121180-1|AAI21181.1| 124|Homo sapiens TAF13 RNA polymerase II... 152 1e-36
BC121181-1|AAI21182.1| 124|Homo sapiens TAF13 RNA polymerase II... 150 4e-36
BC050384-1|AAH50384.1| 328|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
BC035816-1|AAH35816.1| 370|Homo sapiens SUPT3H protein protein. 46 1e-04
AL499610-1|CAH73344.1| 328|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL360272-3|CAH70848.1| 317|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL360272-2|CAH70846.1| 328|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL161905-3|CAI15666.1| 317|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL161905-2|CAI15664.1| 328|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL138880-4|CAI14627.1| 317|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL138880-2|CAI14625.1| 328|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AL096865-3|CAI19927.1| 317|Homo sapiens suppressor of Ty 3 homo... 46 1e-04
AF073930-1|AAC36098.1| 317|Homo sapiens histone acetylase compl... 46 1e-04
AF069734-1|AAC39904.1| 317|Homo sapiens SPT3-like protein protein. 46 1e-04
AF064804-1|AAC70014.1| 399|Homo sapiens transcription factor SU... 42 0.002
S39392-1|AAB22439.2| 703|Homo sapiens protein tyrosine phosphat... 31 4.0
M64572-1|AAA35647.1| 913|Homo sapiens protein-tyrosine phosphat... 31 4.0
BC126117-1|AAI26118.1| 913|Homo sapiens protein tyrosine phosph... 31 5.3
BC033716-1|AAH33716.1| 292|Homo sapiens Unknown (protein for IM... 31 5.3
AL450025-1|CAH73252.1| 913|Homo sapiens protein tyrosine phosph... 31 5.3
AL359963-4|CAH71094.1| 913|Homo sapiens protein tyrosine phosph... 31 5.3
AL162733-1|CAH73386.1| 913|Homo sapiens protein tyrosine phosph... 31 5.3
>X84003-1|CAA58827.1| 124|Homo sapiens PolII transcription factor
TFIID protein.
Length = 124
Score = 152 bits (368), Expect = 1e-36
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDDQNPYTESVD LEDLVIEFITE TH+AM +GR GRVQVEDI+FL+RKD RK+ARV
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARV 100
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
KDLLTMNEELK+ARKAFDE Y
Sbjct: 101 KDLLTMNEELKRARKAFDEANY 122
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
Frame = +1
Query: 199 GGTTSG---RKRLFSKELRCMI 255
GG G RKRLFSKELRCM+
Sbjct: 19 GGAEGGQGKRKRLFSKELRCMM 40
>BX679664-8|CAH71330.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein5 (PGRM) (PGM5) protein.
Length = 124
Score = 152 bits (368), Expect = 1e-36
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDDQNPYTESVD LEDLVIEFITE TH+AM +GR GRVQVEDI+FL+RKD RK+ARV
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARV 100
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
KDLLTMNEELK+ARKAFDE Y
Sbjct: 101 KDLLTMNEELKRARKAFDEANY 122
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
Frame = +1
Query: 199 GGTTSG---RKRLFSKELRCMI 255
GG G RKRLFSKELRCM+
Sbjct: 19 GGAEGGQGKRKRLFSKELRCMM 40
>BC121180-1|AAI21181.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 18kD
protein.
Length = 124
Score = 152 bits (368), Expect = 1e-36
Identities = 69/82 (84%), Positives = 75/82 (91%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDDQNPYTESVD LEDLVIEFITE TH+AM +GR GRVQVEDI+FL+RKD RK+ARV
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRVQVEDIVFLIRKDPRKFARV 100
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
KDLLTMNEELK+ARKAFDE Y
Sbjct: 101 KDLLTMNEELKRARKAFDEANY 122
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
Frame = +1
Query: 199 GGTTSG---RKRLFSKELRCMI 255
GG G RKRLFSKELRCM+
Sbjct: 19 GGAEGGQGKRKRLFSKELRCMM 40
>BC121181-1|AAI21182.1| 124|Homo sapiens TAF13 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 18kD
protein.
Length = 124
Score = 150 bits (364), Expect = 4e-36
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
YGFGDDQNPYTESVD LEDLVIEFITE TH+AM +GR GR QVEDI+FL+RKD RK+ARV
Sbjct: 41 YGFGDDQNPYTESVDILEDLVIEFITEMTHKAMSIGRQGRAQVEDIVFLIRKDPRKFARV 100
Query: 435 KDLLTMNEELKKARKAFDEVKY 500
KDLLTMNEELK+ARKAFDE Y
Sbjct: 101 KDLLTMNEELKRARKAFDEANY 122
Score = 30.3 bits (65), Expect = 7.0
Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 3/22 (13%)
Frame = +1
Query: 199 GGTTSG---RKRLFSKELRCMI 255
GG G RKRLFSKELRCM+
Sbjct: 19 GGAEGGQGKRKRLFSKELRCMM 40
>BC050384-1|AAH50384.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 106 RRLLKYMFIRDYKSKIVKGIDEDDLLED 133
>BC035816-1|AAH35816.1| 370|Homo sapiens SUPT3H protein protein.
Length = 370
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 88 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 147
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 148 RRLLKYMFIRDYKSKIVKGIDEDDLLED 175
>AL499610-1|CAH73344.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 106 RRLLKYMFIRDYKSKIVKGIDEDDLLED 133
>AL360272-3|CAH70848.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AL360272-2|CAH70846.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 106 RRLLKYMFIRDYKSKIVKGIDEDDLLED 133
>AL161905-3|CAI15666.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AL161905-2|CAI15664.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 106 RRLLKYMFIRDYKSKIVKGIDEDDLLED 133
>AL138880-4|CAI14627.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AL138880-2|CAI14625.1| 328|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 328
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 46 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 105
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 106 RRLLKYMFIRDYKSKIVKGIDEDDLLED 133
>AL096865-3|CAI19927.1| 317|Homo sapiens suppressor of Ty 3 homolog
(S. cerevisiae) protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AF073930-1|AAC36098.1| 317|Homo sapiens histone acetylase complex
subunit protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AF069734-1|AAC39904.1| 317|Homo sapiens SPT3-like protein protein.
Length = 317
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD + P E+ +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 35 YSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 94
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 95 RRLLKYMFIRDYKSKIVKGIDEDDLLED 122
>AF064804-1|AAC70014.1| 399|Homo sapiens transcription factor
SUPT3H protein.
Length = 399
Score = 42.3 bits (95), Expect = 0.002
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQV---EDIIFLVRKDARKY 425
Y GD ++ + + +ED+V + +A EV + +V ED++FL+RKD +K
Sbjct: 117 YSLGDARSLFMRTAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKL 176
Query: 426 ARVKDLLTMNEELKKARKAFDEVKYVED 509
R+ + + + K K DE +ED
Sbjct: 177 RRLLKYMFIRDYKSKIVKGIDEDDLLED 204
>S39392-1|AAB22439.2| 703|Homo sapiens protein tyrosine phosphatase
protein.
Length = 703
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 614 VAWPDHGIPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 673
Query: 417 RKY 425
Y
Sbjct: 674 PIY 676
>M64572-1|AAA35647.1| 913|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 913
Score = 31.1 bits (67), Expect = 4.0
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 807 VAWPDHGIPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 866
Query: 417 RKY 425
Y
Sbjct: 867 PIY 869
>BC126117-1|AAI26118.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 807 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 866
Query: 417 RKY 425
Y
Sbjct: 867 PIY 869
>BC033716-1|AAH33716.1| 292|Homo sapiens Unknown (protein for
IMAGE:4452690) protein.
Length = 292
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 186 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 245
Query: 417 RKY 425
Y
Sbjct: 246 PIY 248
>AL450025-1|CAH73252.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 807 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 866
Query: 417 RKY 425
Y
Sbjct: 867 PIY 869
>AL359963-4|CAH71094.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 807 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 866
Query: 417 RKY 425
Y
Sbjct: 867 PIY 869
>AL162733-1|CAH73386.1| 913|Homo sapiens protein tyrosine
phosphatase, non-receptor type 3 protein.
Length = 913
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 IAMYDYGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTG-RVQVEDIIFLVRKDA 416
+A D+G DD + + E V+++ L ++ H + +GRTG V +E + L ++
Sbjct: 807 VAWPDHGVPDDSSDFLEFVNYVRSLRVDSEPVLVHCSAGIGRTGVLVTMETAMCLTERNL 866
Query: 417 RKY 425
Y
Sbjct: 867 PIY 869
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,463,564
Number of Sequences: 237096
Number of extensions: 1344812
Number of successful extensions: 2307
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2295
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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