Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40012
         (706 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071439-1|AAL49061.1|  136|Drosophila melanogaster RE52427p pro...   161   1e-39
AE014134-3203|AAF53875.1|  136|Drosophila melanogaster CG10756-P...   161   1e-39
AY119278-1|AAM51138.1|  604|Drosophila melanogaster SD26982p pro...    30   2.7  
AE014134-3157|AAF53841.1|  604|Drosophila melanogaster CG10463-P...    29   4.7  
AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA...    29   6.2  

>AY071439-1|AAL49061.1|  136|Drosophila melanogaster RE52427p
           protein.
          Length = 136

 Score =  161 bits (390), Expect = 1e-39
 Identities = 74/83 (89%), Positives = 80/83 (96%)
 Frame = +3

Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
           +GFGDD+NPYTE+VD LEDLVIE+I ETTHRAME+GRTGRVQVEDIIFLVRKD RKYARV
Sbjct: 47  FGFGDDKNPYTETVDLLEDLVIEYIAETTHRAMEIGRTGRVQVEDIIFLVRKDPRKYARV 106

Query: 435 KDLLTMNEELKKARKAFDEVKYV 503
           KDLLTMNEELKKARKAFDE+KYV
Sbjct: 107 KDLLTMNEELKKARKAFDEIKYV 129



 Score = 35.5 bits (78), Expect = 0.071
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 205 TTSGRKRLFSKELRCMI 255
           T SGRKRLFSKELRCM+
Sbjct: 30  TNSGRKRLFSKELRCMM 46


>AE014134-3203|AAF53875.1|  136|Drosophila melanogaster CG10756-PA
           protein.
          Length = 136

 Score =  161 bits (390), Expect = 1e-39
 Identities = 74/83 (89%), Positives = 80/83 (96%)
 Frame = +3

Query: 255 YGFGDDQNPYTESVDFLEDLVIEFITETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARV 434
           +GFGDD+NPYTE+VD LEDLVIE+I ETTHRAME+GRTGRVQVEDIIFLVRKD RKYARV
Sbjct: 47  FGFGDDKNPYTETVDLLEDLVIEYIAETTHRAMEIGRTGRVQVEDIIFLVRKDPRKYARV 106

Query: 435 KDLLTMNEELKKARKAFDEVKYV 503
           KDLLTMNEELKKARKAFDE+KYV
Sbjct: 107 KDLLTMNEELKKARKAFDEIKYV 129



 Score = 35.5 bits (78), Expect = 0.071
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 205 TTSGRKRLFSKELRCMI 255
           T SGRKRLFSKELRCM+
Sbjct: 30  TNSGRKRLFSKELRCMM 46


>AY119278-1|AAM51138.1|  604|Drosophila melanogaster SD26982p
           protein.
          Length = 604

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 402 VRKDARKYARVKDLLTMNEELKKARKAFDEVKYVEDNSNHTVAIQPT 542
           +RK    ++R K+L+ M E+L+ ARK  ++ +  ++ S  T   QP+
Sbjct: 167 LRKHEYDFSRSKELIKMAEKLRDARKLMEQQEKEKNLSEETGEKQPS 213


>AE014134-3157|AAF53841.1|  604|Drosophila melanogaster CG10463-PA
           protein.
          Length = 604

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 15/47 (31%), Positives = 28/47 (59%)
 Frame = +3

Query: 402 VRKDARKYARVKDLLTMNEELKKARKAFDEVKYVEDNSNHTVAIQPT 542
           +RK    ++R K+L+ M E+L+ ARK  ++ +  ++ S  T   QP+
Sbjct: 167 LRKHEYDFSRSKELIKMAEKLRDARKLKEQQEKEKNPSEETGEKQPS 213


>AE014297-3011|AAF55897.2| 1489|Drosophila melanogaster CG7922-PA
           protein.
          Length = 1489

 Score = 29.1 bits (62), Expect = 6.2
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +3

Query: 330 TETTHRAMEVGRTGRVQVEDIIFLVRKDARKYARVKDLLTMNEELKK 470
           T  T     +GRTGR +  +++ LV  + R+   +KD+L   +++ K
Sbjct: 523 TNPTRFIQRIGRTGRKKNGEVVMLV-TEGREQQVLKDVLANKDQINK 568


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,206,524
Number of Sequences: 53049
Number of extensions: 441497
Number of successful extensions: 979
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)