Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40011
(360 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15; Bilater... 149 1e-35
UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6; Metazoa|... 102 2e-21
UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia ... 81 6e-15
UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia a... 80 1e-14
UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71; Euteleo... 77 1e-13
UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistos... 75 3e-13
UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2; Caenorha... 71 8e-12
UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes p... 68 4e-11
UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep: ... 68 4e-11
UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2; Eukaryot... 64 9e-10
UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11; Eukar... 62 2e-09
UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17; Eukaryo... 58 5e-08
UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2; Cryptosp... 56 1e-07
UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=... 55 3e-07
UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis vi... 55 4e-07
UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5; Oligohym... 54 8e-07
UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1; Strongyl... 52 2e-06
UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffith... 51 7e-06
UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16; Dikar... 51 7e-06
UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal ... 49 2e-05
UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2; Sordaria... 48 7e-05
UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15; Pezizom... 47 1e-04
UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e, puta... 43 0.001
UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=1... 42 0.002
UniRef50_Q1DN98 Cluster: Putative uncharacterized protein; n=1; ... 35 0.49
UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1; Encephal... 33 1.1
UniRef50_Q5N7L4 Cluster: Putative uncharacterized protein P0519D... 33 1.5
UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1; ... 33 1.5
UniRef50_Q6CMF2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 33 1.5
UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n... 33 2.0
UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa... 33 2.0
UniRef50_Q60J60 Cluster: Putative uncharacterized protein CBG246... 33 2.0
UniRef50_A0EFA7 Cluster: Chromosome undetermined scaffold_93, wh... 32 2.6
UniRef50_Q39524 Cluster: H(+)/hexose cotransporter 2 (Galactose/... 32 3.5
UniRef50_A7BAM5 Cluster: Putative uncharacterized protein; n=1; ... 31 4.6
UniRef50_Q6UUT1 Cluster: Putative paramyosin; n=2; Oryza sativa ... 31 4.6
UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep... 31 6.1
UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2; Lactoc... 31 6.1
UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3; ... 31 6.1
UniRef50_Q24D46 Cluster: Putative uncharacterized protein; n=1; ... 31 6.1
UniRef50_Q22R49 Cluster: RHS Repeat family protein; n=1; Tetrahy... 31 6.1
UniRef50_Q17AQ7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.0
UniRef50_A5KBP6 Cluster: 2-C-methyl-D-erythritol 2,4-cyclodiphos... 31 8.0
UniRef50_P36002 Cluster: Serine/threonine-protein kinase PTK1/ST... 31 8.0
UniRef50_Q01115 Cluster: Frequency clock protein; n=2; Pezizomyc... 31 8.0
>UniRef50_Q5UAT5 Cluster: 60S ribosomal protein L6; n=15;
Bilateria|Rep: 60S ribosomal protein L6 - Bombyx mori
(Silk moth)
Length = 273
Score = 149 bits (362), Expect = 1e-35
Identities = 71/86 (82%), Positives = 71/86 (82%)
Frame = +3
Query: 3 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXX 182
GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF
Sbjct: 144 GILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFKKNKKCVK 203
Query: 183 XXXXXXEGDDIFATKKEKYVPSEQAK 260
EGDDIFATKKEKYVPSEQ K
Sbjct: 204 RTVKRKEGDDIFATKKEKYVPSEQRK 229
Score = 71.7 bits (168), Expect = 4e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL
Sbjct: 229 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 262
>UniRef50_Q9V9W3 Cluster: 60S ribosomal protein L6; n=6;
Metazoa|Rep: 60S ribosomal protein L6 - Drosophila
melanogaster (Fruit fly)
Length = 262
Score = 102 bits (245), Expect = 2e-21
Identities = 49/90 (54%), Positives = 62/90 (68%)
Frame = +3
Query: 6 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXX 185
+L SGLLLVTGPFA NSCPLRR+ QRYVIGTS+++ LG FK+P+H ND YF
Sbjct: 137 VLASGLLLVTGPFALNSCPLRRVSQRYVIGTSSKVDLGAFKVPEHLNDAYFRRLKAKKDK 196
Query: 186 XXXXXEGDDIFATKKEKYVPSEQAKPIRRQ 275
DIFA KKE++VP+EQ K +++
Sbjct: 197 KTGEA---DIFAAKKERFVPNEQRKKDQKE 223
Score = 33.5 bits (73), Expect = 1.1
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K DQK VD A++K I A P+ K YL+ F L
Sbjct: 218 KKDQKEVDAALLKVIKAHPEGKFFAKYLQNMFAL 251
>UniRef50_A7L698 Cluster: 60S ribosomal protein L6; n=1; Artemia
franciscana|Rep: 60S ribosomal protein L6 - Artemia
sanfranciscana (Brine shrimp) (Artemia franciscana)
Length = 241
Score = 81.0 bits (191), Expect = 6e-15
Identities = 43/84 (51%), Positives = 52/84 (61%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 188
L SGLLLV+GP N PLRR+ Q+ VI TSTRI + N K+P+H ND YF
Sbjct: 119 LKSGLLLVSGPLKVNRVPLRRVHQKLVIATSTRIDISNVKVPEHINDTYF----RRHKVK 174
Query: 189 XXXXEGDDIFATKKEKYVPSEQAK 260
EG DIFA+K E+Y P+EQ K
Sbjct: 175 KEAKEG-DIFASKPERYTPTEQRK 197
Score = 35.5 bits (78), Expect = 0.28
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K DQ VD ++KAI A+PD +L YL+ FGL
Sbjct: 197 KKDQAEVDVQLLKAIKAQPDAAMLVKYLRTIFGL 230
>UniRef50_A3F4R4 Cluster: 60S ribosomal protein L6; n=1; Taenia
asiatica|Rep: 60S ribosomal protein L6 - Taenia asiatica
(Asian tapeworm)
Length = 212
Score = 80.2 bits (189), Expect = 1e-14
Identities = 40/89 (44%), Positives = 53/89 (59%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 188
L SGLLLVTGPF +N PLRR+ QRYVI T TRI + N K+P ND++F
Sbjct: 121 LASGLLLVTGPFKYNGVPLRRVNQRYVIATKTRIKIKNIKIPSQLNDEFFRRQDLKTKKS 180
Query: 189 XXXXEGDDIFATKKEKYVPSEQAKPIRRQ 275
D IFA +++KY S+ K +++Q
Sbjct: 181 V-----DKIFAEEEKKYTVSDDRKKLQKQ 204
>UniRef50_Q02878 Cluster: 60S ribosomal protein L6; n=71;
Euteleostomi|Rep: 60S ribosomal protein L6 - Homo
sapiens (Human)
Length = 288
Score = 76.6 bits (180), Expect = 1e-13
Identities = 42/84 (50%), Positives = 50/84 (59%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 188
L SGLLLVTGP N PLRR Q++VI TST+I + N K+PKH D YF
Sbjct: 168 LASGLLLVTGPLVLNRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYF---KKKKLRK 224
Query: 189 XXXXEGDDIFATKKEKYVPSEQAK 260
EG +IF T+KEKY +EQ K
Sbjct: 225 PRHQEG-EIFDTEKEKYEITEQRK 247
>UniRef50_Q5DE99 Cluster: 60S ribosomal protein L6; n=1; Schistosoma
japonicum|Rep: 60S ribosomal protein L6 - Schistosoma
japonicum (Blood fluke)
Length = 238
Score = 75.4 bits (177), Expect = 3e-13
Identities = 38/84 (45%), Positives = 50/84 (59%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 188
L SGLLLVTGPF +N PLRR+ Q YVI TSTRI + F +PKH +D+YF
Sbjct: 115 LKSGLLLVTGPFKYNGVPLRRVNQCYVIATSTRIDISKFDVPKHIDDEYF----RRVDLK 170
Query: 189 XXXXEGDDIFATKKEKYVPSEQAK 260
+ +F+T+ +KY S+ K
Sbjct: 171 ESKTDAGKLFSTETKKYTVSDIRK 194
Score = 37.1 bits (82), Expect = 0.092
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K DQK VD + AI + PD K+L YL++ F L
Sbjct: 194 KEDQKLVDNQIRAAIKSHPDSKILHAYLRSLFSL 227
>UniRef50_P47991 Cluster: 60S ribosomal protein L6; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L6 -
Caenorhabditis elegans
Length = 217
Score = 70.5 bits (165), Expect = 8e-12
Identities = 37/82 (45%), Positives = 48/82 (58%)
Frame = +3
Query: 15 SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXX 194
SGLLLVTGP N PLRRI Q +VI TS ++++ K+P+H ND+YF
Sbjct: 98 SGLLLVTGPHKINGFPLRRIGQAFVIATSLKVNVSGVKIPEHINDEYF------KRKSTA 151
Query: 195 XXEGDDIFATKKEKYVPSEQAK 260
G +IFA+ K +Y SEQ K
Sbjct: 152 QKTGKNIFASGKTEYTVSEQRK 173
Score = 32.7 bits (71), Expect = 2.0
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K D KTVD ++ AI P+ K L GYL F L
Sbjct: 173 KKDIKTVDAPILAAIKKHPEHKFLFGYLGTRFSL 206
>UniRef50_Q6B8B0 Cluster: 60S ribosomal protein L6; n=1; Ixodes
pacificus|Rep: 60S ribosomal protein L6 - Ixodes
pacificus (western blacklegged tick)
Length = 268
Score = 68.1 bits (159), Expect = 4e-11
Identities = 38/84 (45%), Positives = 49/84 (58%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXX 188
L +GLL VTGP+ N CPLRRI Q YVI TST++ L KLP+ +D YF
Sbjct: 144 LKTGLLPVTGPYGVNGCPLRRINQIYVIATSTKLDLSKVKLPEGLDDRYF--KRNKGPKR 201
Query: 189 XXXXEGDDIFATKKEKYVPSEQAK 260
EG +IF K +++V SE+ K
Sbjct: 202 GRKDEG-EIFEAKPQEHVVSEEHK 224
>UniRef50_A7S4S4 Cluster: Predicted protein; n=5; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 244
Score = 68.1 bits (159), Expect = 4e-11
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKH-FNDDYFXXXXXXXXX 185
L SGLLLVTGPF N PLRRIPQ YVI TST I + + KLP+H F D+ +
Sbjct: 124 LNSGLLLVTGPFKINGVPLRRIPQSYVIATSTHIDVSDVKLPEHAFADESY-----FKGE 178
Query: 186 XXXXXEGDDIFATKKEKYVPSEQ 254
+D+F E+ PSEQ
Sbjct: 179 PKKKKRSEDMFEEAAEEKKPSEQ 201
>UniRef50_Q54D63 Cluster: 60S ribosomal protein L6; n=2;
Eukaryota|Rep: 60S ribosomal protein L6 - Dictyostelium
discoideum AX4
Length = 236
Score = 63.7 bits (148), Expect = 9e-10
Identities = 29/50 (58%), Positives = 35/50 (70%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGL+L+TGPF N PLRRI QRYVI TST+I + + K+ ND YF
Sbjct: 115 LDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYF 164
>UniRef50_Q9C9C6 Cluster: 60S ribosomal protein L6-2; n=11;
Eukaryota|Rep: 60S ribosomal protein L6-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 233
Score = 62.5 bits (145), Expect = 2e-09
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGLLLVTGPF N PLRR+ Q YVIGTST++ + L K F+D YF
Sbjct: 113 LASGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISGVTLDK-FDDKYF 161
Score = 33.9 bits (74), Expect = 0.86
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 224 KKREIRSI*AGKTD-QKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
+K E + I GK D QK VD A+IKAI A P+ L+ YL A F L
Sbjct: 180 EKEEKKEIPQGKKDDQKAVDAALIKAIEAVPE---LKTYLGARFSL 222
>UniRef50_Q01IK4 Cluster: 60S ribosomal protein L6; n=17;
Eukaryota|Rep: 60S ribosomal protein L6 - Oryza sativa
(Rice)
Length = 222
Score = 58.0 bits (134), Expect = 5e-08
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGLLLVTGPF N P+RR+ Q YVI TST++ + + K F+D YF
Sbjct: 102 LKSGLLLVTGPFKINGVPIRRVNQPYVIATSTKVDISGVNVEK-FDDKYF 150
Score = 31.9 bits (69), Expect = 3.5
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 257 KTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K DQK VD +IKAI A PD L+ YL A F L
Sbjct: 181 KEDQKVVDAELIKAIEAVPD---LKTYLGARFSL 211
>UniRef50_Q5CM54 Cluster: 60S ribosomal protein L6; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L6 -
Cryptosporidium hominis
Length = 184
Score = 56.4 bits (130), Expect = 1e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
LPSGL++VTGP+A N P+RR+ Y+I TST++ + + K F D+YF
Sbjct: 63 LPSGLVVVTGPYALNGVPVRRVNPAYIIATSTKVDVSKADVSK-FTDEYF 111
>UniRef50_Q4N3I8 Cluster: 60S ribosomal protein L6e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L6e, putative -
Theileria parva
Length = 212
Score = 55.2 bits (127), Expect = 3e-07
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +3
Query: 6 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 110
+L SGLLLVTGPF+FN PLRR+ RYVI TST +
Sbjct: 67 VLKSGLLLVTGPFSFNGVPLRRVNSRYVIATSTNV 101
>UniRef50_A5C5P0 Cluster: 60S ribosomal protein L6; n=1; Vitis
vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera
(Grape)
Length = 249
Score = 54.8 bits (126), Expect = 4e-07
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGLLL+TG F N PLRR+ Q YVI TST++ + + K F+D YF
Sbjct: 164 LSSGLLLITGSFKINGVPLRRVNQAYVIATSTKVDIPKVNVEK-FDDKYF 212
>UniRef50_A0CYT3 Cluster: 60S ribosomal protein L6; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L6 -
Paramecium tetraurelia
Length = 208
Score = 54.0 bits (124), Expect = 8e-07
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGLLLVTGPF N PL+R+ YVI TST++ + NDDYF
Sbjct: 82 LKSGLLLVTGPFKINGVPLKRVNSAYVIPTSTKVDVTGVN-ANQINDDYF 130
>UniRef50_A0N0S1 Cluster: 60S ribosomal protein L6; n=1;
Strongyloides papillosus|Rep: 60S ribosomal protein L6 -
Strongyloides papillosus
Length = 127
Score = 52.4 bits (120), Expect = 2e-06
Identities = 28/80 (35%), Positives = 40/80 (50%)
Frame = +3
Query: 21 LLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYFXXXXXXXXXXXXXX 200
L GPF+ N P+RRI Q++V+ TST+I + K+P DDYF
Sbjct: 10 LFTFLGPFSINGVPVRRIAQKFVLPTSTKIDVSGVKIPATMTDDYF------KRTKYFGK 63
Query: 201 EGDDIFATKKEKYVPSEQAK 260
E DIF K++Y ++ K
Sbjct: 64 EKKDIFEQGKQEYTLTDARK 83
Score = 41.5 bits (93), Expect = 0.004
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +2
Query: 227 KREIRSI*AGKTDQKTVDEAVIKAIGARPDKKVLRGYLKAAFGL 358
K+E A K DQKT+D AV+ +I D K+L GYL+ FGL
Sbjct: 73 KQEYTLTDARKADQKTIDTAVLGSIKKHTDGKLLAGYLRTNFGL 116
>UniRef50_Q7XY83 Cluster: 60S ribosomal protein L6; n=1; Griffithsia
japonica|Rep: 60S ribosomal protein L6 - Griffithsia
japonica (Red alga)
Length = 216
Score = 50.8 bits (116), Expect = 7e-06
Identities = 26/50 (52%), Positives = 32/50 (64%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SG LLVTGP+A N PL R+ QRYVI TST I + + K ++ YF
Sbjct: 96 LDSGQLLVTGPYAVNRIPLTRVDQRYVIATSTSIDVSKVDV-KKIDNAYF 144
>UniRef50_Q02326 Cluster: 60S ribosomal protein L6-A; n=16;
Dikarya|Rep: 60S ribosomal protein L6-A - Saccharomyces
cerevisiae (Baker's yeast)
Length = 176
Score = 50.8 bits (116), Expect = 7e-06
Identities = 24/50 (48%), Positives = 32/50 (64%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L LL++GPF N PLRR+ RYVI TST++S+ + K FN +YF
Sbjct: 58 LEDNTLLISGPFKVNGVPLRRVNARYVIATSTKVSVEGVNVEK-FNVEYF 106
>UniRef50_UPI0000DA1E66 Cluster: PREDICTED: similar to ribosomal
protein L6; n=5; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L6 - Rattus norvegicus
Length = 112
Score = 49.2 bits (112), Expect = 2e-05
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDDYF 158
L SGLLLVTGP A N PL R+ Q VI T T++ + K KH D F
Sbjct: 33 LGSGLLLVTGPLALNRVPLCRMHQSVVISTFTKVDICKVKTSKHLTDASF 82
>UniRef50_Q7SH22 Cluster: 60S ribosomal protein L6; n=2;
Sordariaceae|Rep: 60S ribosomal protein L6 - Neurospora
crassa
Length = 207
Score = 47.6 bits (108), Expect = 7e-05
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 116
L G+LLVTGPF N PLRR+ RYVI TS ++ L
Sbjct: 63 LDQGVLLVTGPFKINGVPLRRVNARYVIATSQKVDL 98
>UniRef50_Q1DRV0 Cluster: 60S ribosomal protein L6; n=15;
Pezizomycotina|Rep: 60S ribosomal protein L6 -
Coccidioides immitis
Length = 206
Score = 46.8 bits (106), Expect = 1e-04
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 116
L G+LLVTGPF N PLRR+ RYVI TS+ + L
Sbjct: 82 LGQGVLLVTGPFKLNGVPLRRVNARYVIATSSTVDL 117
>UniRef50_Q4X638 Cluster: 60S ribosomal subunit protein L6e,
putative; n=5; Plasmodium|Rep: 60S ribosomal subunit
protein L6e, putative - Plasmodium chabaudi
Length = 241
Score = 43.2 bits (97), Expect = 0.001
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3
Query: 6 ILPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRI 110
+L SGLL V GP+ N PL+R+ RY+I TST I
Sbjct: 97 VLKSGLLAVVGPYEVNGVPLKRVDPRYLIVTSTNI 131
>UniRef50_Q4Q4D3 Cluster: 60S ribosomal protein L6, putative; n=11;
Trypanosomatidae|Rep: 60S ribosomal protein L6, putative
- Leishmania major
Length = 195
Score = 42.3 bits (95), Expect = 0.002
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +3
Query: 15 SGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISLGN 122
+G L+V+GP +N P+RRI RYVI TST + + +
Sbjct: 60 NGPLVVSGPMKYNGVPIRRIDSRYVIATSTTVDISS 95
>UniRef50_Q1DN98 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 655
Score = 34.7 bits (76), Expect = 0.49
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 1/87 (1%)
Frame = +1
Query: 103 PEFHSATSNC-QNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSR 279
P+ H S Q + + + + SN + + KR +S+ ++ + + N + D+
Sbjct: 396 PDLHILDSEMPQPSPTEVEPTKAKKRSNSRKSTKRSTSSVSNERNAILYETEGNMNADNA 455
Query: 280 RGCDQSHRSPTRQEGAPRIPQSGLRTP 360
G D S P +Q G+P SG + P
Sbjct: 456 NG-DASATQPQQQSGSPNQENSGPKPP 481
>UniRef50_Q8SR91 Cluster: 60S RIBOSOMAL PROTEIN L6; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L6 -
Encephalitozoon cuniculi
Length = 155
Score = 33.5 bits (73), Expect = 1.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRISL 116
L + L GP + N PL RI +RY++ TST + L
Sbjct: 51 LEDNIALCAGPKSINGIPLFRIDERYLLATSTVLDL 86
>UniRef50_Q5N7L4 Cluster: Putative uncharacterized protein
P0519D04.23; n=3; Oryza sativa|Rep: Putative
uncharacterized protein P0519D04.23 - Oryza sativa
subsp. japonica (Rice)
Length = 349
Score = 33.1 bits (72), Expect = 1.5
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 97 PPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKR--NTFHLSRQNRSE 270
PPP H + +++ SRR R+ S+ S ++R + +++R + R++R
Sbjct: 73 PPPPPHEPSRTGRHSRSPSPSRRHRTRSSSPSRSRRHRSRSRERRRRSRSREREREDRRA 132
Query: 271 DSRRGCDQSH-RSPTRQEG 324
RR +S RSP+R+ G
Sbjct: 133 SRRRSRSRSRSRSPSRRSG 151
>UniRef50_A0JCX9 Cluster: Putative uncharacterized protein; n=1;
Glyptapanteles indiensis|Rep: Putative uncharacterized
protein - Glyptapanteles indiensis
Length = 1065
Score = 33.1 bits (72), Expect = 1.5
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Frame = +1
Query: 106 EFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFH----------LSR 255
++ S N ++I S + N QSN++ + T++P K+N+ H LS+
Sbjct: 523 QYMSINQNSFKQDLLIGSPE-NNIYNHQSNSRTIRTTIPSMKQNSTHPSNPMHQTSELSQ 581
Query: 256 QNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLRTP 360
Q +S+ +++ Q P+ + G P++ R P
Sbjct: 582 QRQSQPNQQDSQQHSHRPSMRIGISIKPKNNRRIP 616
>UniRef50_Q6CMF2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 906
Score = 33.1 bits (72), Expect = 1.5
Identities = 18/90 (20%), Positives = 34/90 (37%)
Frame = +1
Query: 91 SAPPPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSE 270
+AP +A+S Q ++ + Q ++ + PQ+++N H S + +
Sbjct: 277 TAPMATHSAASSQQQQQQQQQQQQQQQQQQQQQQQPQQPIKPQPQRQQNNTHPSSVQQHQ 336
Query: 271 DSRRGCDQSHRSPTRQEGAPRIPQSGLRTP 360
+ H G P +P G TP
Sbjct: 337 QQQHHLQMQHHLQGFYNGVPGVPNGGYYTP 366
>UniRef50_UPI0000DC20AA Cluster: UPI0000DC20AA related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC20AA UniRef100 entry -
Rattus norvegicus
Length = 261
Score = 32.7 bits (71), Expect = 2.0
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 9 LPSGLLLVTGPFAFNSCPLRRIPQRYVIGTSTRIS 113
L G LL+TGP A N L R Q+ V+ TST I+
Sbjct: 156 LSRGFLLITGPLALNLVLLYRTHQKSVVITSTTIN 190
>UniRef50_Q0J1B9 Cluster: Os09g0451700 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0451700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 180
Score = 32.7 bits (71), Expect = 2.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 291 SKPSEPDPTRRCSADTSKRPS 353
++ S P+PTR CSA+ SKRPS
Sbjct: 13 TRSSPPNPTRTCSAEHSKRPS 33
>UniRef50_Q60J60 Cluster: Putative uncharacterized protein CBG24673;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24673 - Caenorhabditis
briggsae
Length = 505
Score = 32.7 bits (71), Expect = 2.0
Identities = 21/67 (31%), Positives = 31/67 (46%)
Frame = +1
Query: 160 RRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCDQSHRSPTRQEGAPRIP 339
+R RS SN + R + P +KR+ R NRS S R +S + +PR
Sbjct: 216 QRKRSRSNERRRRDRRESPSPIRKRSRSRSLRMNRSSRSNRASSRSVERNRKMSRSPRRN 275
Query: 340 QSGLRTP 360
+S R+P
Sbjct: 276 RSRSRSP 282
>UniRef50_A0EFA7 Cluster: Chromosome undetermined scaffold_93, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined scaffold_93, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1566
Score = 32.3 bits (70), Expect = 2.6
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 225 KKEKYVPSEQAKPIRRQSTRL*SKPSEPDPTRRCSADTSK 344
++ K +P E+ KP+ + T + + EP PT S +T+K
Sbjct: 692 EEPKPIPEEEPKPVPEEETPIPEEEQEPIPTEPASVNTTK 731
>UniRef50_Q39524 Cluster: H(+)/hexose cotransporter 2
(Galactose/H(+) symporter); n=4; Viridiplantae|Rep:
H(+)/hexose cotransporter 2 (Galactose/H(+) symporter) -
Chlorella kessleri
Length = 540
Score = 31.9 bits (69), Expect = 3.5
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = -2
Query: 257 CLLRWNVFLFFCGKDVI-TLFAFDC 186
C +RW VFLFF G VI T F + C
Sbjct: 454 CAMRWGVFLFFAGWVVIMTFFVYFC 478
>UniRef50_A7BAM5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 350
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = -3
Query: 322 LLVGSGSDGFDHSLVDCLLIGFACSDGTYFSFFVAKMSSPSLRLTV 185
+LV SG GF S+ CLL+G AC G +F A + P+L +T+
Sbjct: 94 VLVQSGV-GFWASIAICLLVGLAC--GLVNAFMTAYVGLPALAVTI 136
>UniRef50_Q6UUT1 Cluster: Putative paramyosin; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Putative paramyosin -
Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 31.5 bits (68), Expect = 4.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 256 QNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLR 354
+ R ED + G D+S P R+ G +PQSG R
Sbjct: 16 KGREEDGQNGSDKSSAWPAREGGGGGLPQSGGR 48
>UniRef50_Q7NID4 Cluster: Gll2249 protein; n=8; Cyanobacteria|Rep:
Gll2249 protein - Gloeobacter violaceus
Length = 544
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 27 LVTGPFAFNSCPLRRIPQRYVIGTSTRISLGNFKLPKHFNDD 152
L+ F S PL Q + +G +T +G LP+HFNDD
Sbjct: 53 LILNGLGFVSAPLYLFEQ-FFVGKATEHLIGPGVLPEHFNDD 93
>UniRef50_A2RKU3 Cluster: Cation-transporting ATPase; n=2;
Lactococcus lactis subsp. cremoris|Rep:
Cation-transporting ATPase - Lactococcus lactis subsp.
cremoris (strain MG1363)
Length = 841
Score = 31.1 bits (67), Expect = 6.1
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 3 GILPSGLLLVTGPFAFNSCPLRRIPQR--YVIGTSTRIS 113
GI+P +L++ F F+S L IPQR +IGT+ I+
Sbjct: 220 GIIPISILVLLNQFVFSSLDLSVIPQRKTAIIGTAATIT 258
>UniRef50_Q8IHP9 Cluster: Putative uncharacterized protein; n=3;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 2940
Score = 31.1 bits (67), Expect = 6.1
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 151 ITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCDQSHRSPTRQEGAP 330
IT I+ N+ S+ K SLP+KK N + + QN + Q+ + +P
Sbjct: 1586 ITKNTIQEQKNIHSDNKYETCSLPEKK-NIYEPNSQNSPNSQKLPNSQNLSNSQNLPNSP 1644
Query: 331 RIPQS 345
+P S
Sbjct: 1645 NLPNS 1649
>UniRef50_Q24D46 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1074
Score = 31.1 bits (67), Expect = 6.1
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = +1
Query: 169 RSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSG 348
+S SN S+ + L K+N + +Q +++++ + + PT +E A + Q+
Sbjct: 1002 QSQSNSNSSRANIFEQLENFKKNIEEIRKQGQADENNLNMNNGYTQPTPEEQAMIVAQNR 1061
Query: 349 LR 354
+R
Sbjct: 1062 IR 1063
>UniRef50_Q22R49 Cluster: RHS Repeat family protein; n=1;
Tetrahymena thermophila SB210|Rep: RHS Repeat family
protein - Tetrahymena thermophila SB210
Length = 6771
Score = 31.1 bits (67), Expect = 6.1
Identities = 19/82 (23%), Positives = 35/82 (42%)
Frame = +1
Query: 100 PPEFHSATSNCQNTSMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSR 279
PP+ H T + + ++++ + A NV+++ V +K N F +RQ + D
Sbjct: 456 PPKIHQFTQSVKQAKLVLSQNNSQVALNVETDGGDVFV----EKNNIFSQNRQRNNSDLS 511
Query: 280 RGCDQSHRSPTRQEGAPRIPQS 345
+ S+ Q I QS
Sbjct: 512 NKLNSSYMLNASQNRLNNINQS 533
>UniRef50_Q17AQ7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 308
Score = 30.7 bits (66), Expect = 8.0
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 115 SATSNCQNTSMMITSRRIRSA-SNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCD 291
S S Q + + R S++QS+ RV +SLP K ++ S+ N S+ +
Sbjct: 91 SPKSRAQRPESRVKNLEARGPKSSIQSSESRVQSSLP-KVQSPESSSQTNSSDQGPKSSA 149
Query: 292 QSHRSPTRQ-EGAPRIPQSGLRTP 360
QS RS + + + P+S +++P
Sbjct: 150 QSPRSRVQSPKSRVQCPESRVKSP 173
>UniRef50_A5KBP6 Cluster: 2-C-methyl-D-erythritol
2,4-cyclodiphosphate synthase; n=3; Plasmodium|Rep:
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
Plasmodium vivax
Length = 287
Score = 30.7 bits (66), Expect = 8.0
Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = -3
Query: 337 VSAEHLLVGSGSDG--FDHSLVDCLLIGFACSD-GTYF 233
V E + V S SDG H+LVD LL G +CSD GT F
Sbjct: 152 VPVETISVLSHSDGDVIFHALVDALLGGMSCSDLGTLF 189
>UniRef50_P36002 Cluster: Serine/threonine-protein kinase PTK1/STK1;
n=2; Saccharomyces cerevisiae|Rep:
Serine/threonine-protein kinase PTK1/STK1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 649
Score = 30.7 bits (66), Expect = 8.0
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Frame = +1
Query: 100 PPEFHSATSNCQNTS------MMITSRRIRSASNVQSNAKRVMTSLPQK----KRNTFHL 249
PP+FHS ++N +S + TSRR S ++ +N+KR ++S K ++ +
Sbjct: 45 PPDFHSTSTNDSESSSPKLPNSLKTSRRANSFAHT-TNSKRSLSSASTKILPPAGSSTSI 103
Query: 250 SRQNRSEDSRRGCDQSHRSPTR 315
SR NR + R S S R
Sbjct: 104 SRGNRHSSTSRNLSNSKFSSER 125
>UniRef50_Q01115 Cluster: Frequency clock protein; n=2;
Pezizomycotina|Rep: Frequency clock protein -
Leptosphaeria australiensis
Length = 992
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/57 (24%), Positives = 29/57 (50%)
Frame = +1
Query: 142 SMMITSRRIRSASNVQSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCDQSHRSPT 312
S+ + R+ +++Q+N+ R + +RN+ S D+ + DQS+ +PT
Sbjct: 28 SVTLRHHRLARDASLQANSSRSQAATSSPRRNSSDESHDTGQSDANKWFDQSNLNPT 84
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 366,007,634
Number of Sequences: 1657284
Number of extensions: 6543966
Number of successful extensions: 20315
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 19653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20291
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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