Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40011
         (360 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   2.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          22   6.1  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    22   8.0  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -3

Query: 298 GFDHSLVDCLLIGFACSDGTYFSFFVAKMSSPSLRLT 188
           G D  +  CL+   +C DG Y+S +V +   P  +L+
Sbjct: 596 GSDAKIERCLMKDESCPDG-YYSDYVLQEEGPLKQLS 631


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 16/58 (27%), Positives = 26/58 (44%)
 Frame = +1

Query: 187 QSNAKRVMTSLPQKKRNTFHLSRQNRSEDSRRGCDQSHRSPTRQEGAPRIPQSGLRTP 360
           +S +K +  S   + R+      ++RS  SR    +S  S +R     R  +S  RTP
Sbjct: 407 RSRSKSLSKSSRSRSRSLSRSVSRSRSRGSR---SRSRTSQSRSRSKTRTSRSRSRTP 461


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 232 RNTFHLSRQNRSEDSRRGCDQSHRSPTRQ 318
           RN FHL + NR+  +    + S R+  R+
Sbjct: 140 RNNFHLPKSNRNCRTAARRNHSSRNTCRR 168


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 379,668
Number of Sequences: 2352
Number of extensions: 7382
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)