Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40007
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.090
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.6  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    22   5.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.9  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.9  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.9  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.090
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 1/94 (1%)
 Frame = -1

Query: 427 ESEEQQERHHKTEQTHSLRQGETQNGV*EPLLLEGGVPGIADDEGAEDCSNSSS-GTSYP 251
           + ++QQ+R  + ++   LR  E +  V E     GG        G+ D S  ++  T+  
Sbjct: 165 QQQQQQQRQQQRQEERRLRPDEIKVEVGEDEFANGGAARDESKAGSTDASTPATVTTTGA 224

Query: 250 TVAAPAPMNLAAESMSLVTDVVWKDRTAESCVGT 149
           T   PA         +    V   + TA    GT
Sbjct: 225 TTTLPAASATGTGPATPSAVVATSNATAAMTTGT 258


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/28 (32%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -1

Query: 448 FLKVNSLESEEQQERHHK-TEQTHSLRQ 368
           F++ +SL  ++QQ++HH+ +   H+  Q
Sbjct: 91  FMQQHSLYLQQQQQQHHQDSSSEHASNQ 118



 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 51  WRQTAFCFYKVRRATTK 1
           W Q  FC+++   AT K
Sbjct: 533 WFQNTFCYFRRNAATWK 549


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 268 SWNWNSLRLPH 300
           +WNWN+L  P+
Sbjct: 25  NWNWNTLLRPN 35


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 268 SWNWNSLRLPH 300
           +WNWN+L  P+
Sbjct: 69  NWNWNTLLRPN 79


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 268 SWNWNSLRLPH 300
           +WNWN+L  P+
Sbjct: 69  NWNWNTLLRPN 79


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +1

Query: 268 SWNWNSLRLPH 300
           +WNWN+L  P+
Sbjct: 69  NWNWNTLLRPN 79


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 247 QWDSWFRSWNWNSLR 291
           Q   WF  +NW  LR
Sbjct: 621 QKHKWFDGFNWEGLR 635


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,792
Number of Sequences: 438
Number of extensions: 4065
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)