Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40005
(718 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007714-1|CAA07619.2| 926|Homo sapiens lysine-ketoglutarate re... 122 2e-27
AF229180-1|AAF44328.1| 926|Homo sapiens alpha-aminoadipate semi... 122 2e-27
AC006020-2|AAF03526.1| 926|Homo sapiens lysine ketoglutarate re... 122 2e-27
BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein. 36 0.11
AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for S... 36 0.11
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S... 36 0.11
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S... 36 0.11
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S... 36 0.11
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S... 36 0.11
AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein. 36 0.11
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int... 36 0.11
AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional co-acti... 36 0.11
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein. 36 0.11
BC105111-1|AAI05112.1| 884|Homo sapiens protocadherin alpha sub... 30 7.2
BC104776-1|AAI04777.1| 884|Homo sapiens protocadherin alpha sub... 30 7.2
BC063288-1|AAH63288.1| 1007|Homo sapiens protocadherin alpha sub... 30 7.2
AF152474-1|AAD43735.1| 884|Homo sapiens protocadherin alpha C2 ... 30 7.2
AF152304-1|AAD43698.1| 1007|Homo sapiens protocadherin alpha C2 ... 30 7.2
>AJ007714-1|CAA07619.2| 926|Homo sapiens lysine-ketoglutarate
reductase /saccharopine dehydrogenase protein.
Length = 926
Score = 122 bits (293), Expect = 2e-27
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +1
Query: 361 GAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSSKVQEYLCVPS 540
G PALPH+++AICDISAD GGSIEFM ECTTI+ PFC+YDAD++ S + L
Sbjct: 341 GCPALPHKLVAICDISADTGGSIEFMTECTTIEHPFCMYDADQHIIHDSVEGSGILMCSI 400
Query: 541 ITCQLQLPRESTDFFGDLLYPYAEDIMKSDATKPLEEHKF 660
QLP E+T+ FGD+LYPY E+++ SDAT+PLE F
Sbjct: 401 DNLPAQLPIEATECFGDMLYPYVEEMILSDATQPLESQNF 440
>AF229180-1|AAF44328.1| 926|Homo sapiens alpha-aminoadipate
semialdehyde synthase protein.
Length = 926
Score = 122 bits (293), Expect = 2e-27
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +1
Query: 361 GAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSSKVQEYLCVPS 540
G PALPH+++AICDISAD GGSIEFM ECTTI+ PFC+YDAD++ S + L
Sbjct: 341 GCPALPHKLVAICDISADTGGSIEFMTECTTIEHPFCMYDADQHIIHDSVEGSGILMCSI 400
Query: 541 ITCQLQLPRESTDFFGDLLYPYAEDIMKSDATKPLEEHKF 660
QLP E+T+ FGD+LYPY E+++ SDAT+PLE F
Sbjct: 401 DNLPAQLPIEATECFGDMLYPYVEEMILSDATQPLESQNF 440
>AC006020-2|AAF03526.1| 926|Homo sapiens lysine ketoglutarate
reductase/saccharopine dehydrogenase protein.
Length = 926
Score = 122 bits (293), Expect = 2e-27
Identities = 56/100 (56%), Positives = 71/100 (71%)
Frame = +1
Query: 361 GAPALPHRMLAICDISADPGGSIEFMNECTTIDTPFCLYDADRNKDTKSSKVQEYLCVPS 540
G PALPH+++AICDISAD GGSIEFM ECTTI+ PFC+YDAD++ S + L
Sbjct: 341 GCPALPHKLVAICDISADTGGSIEFMTECTTIEHPFCMYDADQHIIHDSVEGSGILMCSI 400
Query: 541 ITCQLQLPRESTDFFGDLLYPYAEDIMKSDATKPLEEHKF 660
QLP E+T+ FGD+LYPY E+++ SDAT+PLE F
Sbjct: 401 DNLPAQLPIEATECFGDMLYPYVEEMILSDATQPLESQNF 440
>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
Length = 1359
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 400 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 431
>AL121575-8|CAB92073.1| 886|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 886
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 406 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 437
>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1368
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 400 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 431
>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1374
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 406 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 437
>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1364
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 400 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 431
>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1365
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 406 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 437
>AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.
Length = 1364
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 400 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 431
>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 1368
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 400 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 431
>AF104255-1|AAD12724.1| 936|Homo sapiens transcriptional
co-activator CRSP130 protein.
Length = 936
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 456 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 487
>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
Length = 1421
Score = 36.3 bits (80), Expect = 0.11
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 589 DLLYPYAEDIMKSDATKPLEEHKFLLRCLWVY 684
DLLYP E I D KP H F + C+W++
Sbjct: 453 DLLYPEKEYIPVPDINKPQSTHAFAMTCIWIH 484
>BC105111-1|AAI05112.1| 884|Homo sapiens protocadherin alpha
subfamily C, 2, isoform 2 precursor protein.
Length = 884
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 216 DGSDTKIAPYTSVWSTASIGQLTVRNYSRYLMRTPHHAGTYPVVTEEHRSPGVTAQNAGN 395
+GS TK Y + TA G T Y+ P +G VT+ G + QNAGN
Sbjct: 784 NGSLTKTYCYKACL-TAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGN 842
Query: 396 L 398
L
Sbjct: 843 L 843
>BC104776-1|AAI04777.1| 884|Homo sapiens protocadherin alpha
subfamily C, 2, isoform 2 precursor protein.
Length = 884
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 216 DGSDTKIAPYTSVWSTASIGQLTVRNYSRYLMRTPHHAGTYPVVTEEHRSPGVTAQNAGN 395
+GS TK Y + TA G T Y+ P +G VT+ G + QNAGN
Sbjct: 784 NGSLTKTYCYKACL-TAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGN 842
Query: 396 L 398
L
Sbjct: 843 L 843
>BC063288-1|AAH63288.1| 1007|Homo sapiens protocadherin alpha
subfamily C, 2 protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 216 DGSDTKIAPYTSVWSTASIGQLTVRNYSRYLMRTPHHAGTYPVVTEEHRSPGVTAQNAGN 395
+GS TK Y + TA G T Y+ P +G VT+ G + QNAGN
Sbjct: 784 NGSLTKTYCYKACL-TAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGN 842
Query: 396 L 398
L
Sbjct: 843 L 843
>AF152474-1|AAD43735.1| 884|Homo sapiens protocadherin alpha C2
short form protein protein.
Length = 884
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 216 DGSDTKIAPYTSVWSTASIGQLTVRNYSRYLMRTPHHAGTYPVVTEEHRSPGVTAQNAGN 395
+GS TK Y + TA G T Y+ P +G VT+ G + QNAGN
Sbjct: 784 NGSLTKTYCYKACL-TAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGN 842
Query: 396 L 398
L
Sbjct: 843 L 843
>AF152304-1|AAD43698.1| 1007|Homo sapiens protocadherin alpha C2
protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.2
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +3
Query: 216 DGSDTKIAPYTSVWSTASIGQLTVRNYSRYLMRTPHHAGTYPVVTEEHRSPGVTAQNAGN 395
+GS TK Y + TA G T Y+ P +G VT+ G + QNAGN
Sbjct: 784 NGSLTKTYCYKACL-TAGSGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGN 842
Query: 396 L 398
L
Sbjct: 843 L 843
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,652,626
Number of Sequences: 237096
Number of extensions: 2312158
Number of successful extensions: 4947
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4941
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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