Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV40003
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.1  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   9.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   9.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 315 ISENAYQLPQYYVGGRNDDPPSPVYQSPYGGGTW 416
           I+E A  LP  Y    +    +P++ S Y  G W
Sbjct: 100 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIW 133


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 315 ISENAYQLPQYYVGGRNDDPPSPVYQSPYGGGTW 416
           I+E A  LP  Y    +    +P++ S Y  G W
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIW 366


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 315 ISENAYQLPQYYVGGRNDDPPSPVYQSPYGGGTW 416
           I+E A  LP  Y    +    +P++ S Y  G W
Sbjct: 333 ITEVAPVLPGNYANASSVGSRNPIHTSSYMTGIW 366


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 363 NDDPPSPVYQSPYGGGT 413
           +DD  SP+ ++ YGG T
Sbjct: 17  SDDESSPLTENIYGGST 33


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 363 NDDPPSPVYQSPYGGGT 413
           +DD  SP+ ++ YGG T
Sbjct: 17  SDDESSPLTENIYGGST 33


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 363 NDDPPSPVYQSPYGGGT 413
           +DD  SP+ ++ YGG T
Sbjct: 17  SDDESSPLTENIYGGST 33


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 363 NDDPPSPVYQSPYGGGT 413
           +DD  SP+ ++ YGG T
Sbjct: 17  SDDESSPLTENIYGGST 33


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 229 FVDCFEVLLLFDTSEHY 179
           ++ CF +LL +  S+HY
Sbjct: 5   YIACFLLLLYYIYSKHY 21


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 643 DICSWYIDW 669
           +ICS+Y DW
Sbjct: 286 EICSFYSDW 294


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = +1

Query: 136  NSVNFKMFKHQLSSRNVHSY 195
            NS+ FK+  H+     +H Y
Sbjct: 1410 NSLTFKLKPHESDVEPIHGY 1429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,751
Number of Sequences: 336
Number of extensions: 4279
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)