Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV40002
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 25 0.75
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 25 0.75
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 0.75
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 0.75
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 25 0.75
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 3.0
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 7.0
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 96 NNYNNYNKHNYNKLYYNINYIEQIPIPV 123
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 329 NNYNNYNKHNYNKLYYNINYIEQIPIPV 356
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 25.0 bits (52), Expect = 0.75
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 222 NGFTNRTQHEYNIRVFNESLLEQILLKI 305
N + N +H YN +N + +EQI + +
Sbjct: 329 NNYNNYNKHNYNKLYYNINYIEQIPIPV 356
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 25.0 bits (52), Expect = 0.75
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 165 SPIVNILLYFIVTVPFVI*NGFTNRTQHEYNIRVFNESLLEQILLK 302
SP+ + LY++ T PF+ N Q++ +FN + +I+ K
Sbjct: 269 SPLSSRSLYYVNTKPFMKSEYGANNVQYQGVQDIFNTESIAKIMSK 314
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 165 SPIVNILLYFIVTVPFVI*NGFTNRTQHEYNIRVFNESLLEQILLK 302
SP+ + LY++ T PF+ N Q++ + + N L + + K
Sbjct: 266 SPLASHGLYYVNTAPFMKSQFGENNVQYQGSEDILNTQSLAKAVSK 311
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +2
Query: 473 TIARNMGASKRALKDVLHILY 535
T+ ++KR + DVL++LY
Sbjct: 63 TVKELANSAKRDINDVLNVLY 83
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,344
Number of Sequences: 438
Number of extensions: 3008
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -