Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31056
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.30 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.7  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   4.9  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   6.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.5  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.30
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = -3

Query: 744 INLNSFEGLFLLQNVMSSTLTISNRN 667
           I L  FEG+ +L N++ S++   NRN
Sbjct: 332 IPLTEFEGIDVLGNIIESSILSPNRN 357


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 15/63 (23%), Positives = 25/63 (39%)
 Frame = +3

Query: 414 RWPITKQYRQIPPNCRKGTWQLVGKPNKEAAKKPTKSGRGVYPCRTRRGS*CTRPIICDQ 593
           ++PI K   Q          + V +P +E  +KP+ +     P R    + CT+      
Sbjct: 371 KYPILKAIHQTLGGSSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTLCTKAGYVRD 430

Query: 594 PCD 602
           P D
Sbjct: 431 PDD 433


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 152 STKPLICGKTNPIFCYPPNF 211
           ST PL+    NP +  PP++
Sbjct: 14  STSPLLTPPHNPAYSPPPSY 33


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -3

Query: 597 KAGRRLLVLCIKSLSWFCMDIRHDRTSSVFWRPP 496
           + G  + VL I SLS   MD   D     FW  P
Sbjct: 66  EVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 376 AWTWCRR*SFRKIDGRS 426
           AW +C R S R   GRS
Sbjct: 192 AWVYCTRYSDRPSSGRS 208


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/30 (23%), Positives = 19/30 (63%)
 Frame = +1

Query: 142 DWQINKTAYLWKDESNFLLSTKFLDWFKSV 231
           D ++NKT  +W   ++ +   ++ +++KS+
Sbjct: 276 DEELNKTKPIWTRNADDISQEEYGEFYKSL 305


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/45 (26%), Positives = 22/45 (48%)
 Frame = -2

Query: 556 LLVLHGYTPRPDFVGFLAASLFGLPTSCQVPLRQFGGICRYCFVI 422
           +L +  Y+    +  ++  +  GLPT     L +F G C Y +V+
Sbjct: 138 VLSISVYSSSVGYTQYVRIAAKGLPTLKLFALHEFYGFC-YLWVL 181


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,576
Number of Sequences: 336
Number of extensions: 4683
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)