Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31056
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069) 38 0.007
SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05) 38 0.012
SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10) 32 0.46
SB_6743| Best HMM Match : Mab-21 (HMM E-Value=0.086) 31 1.1
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 29 3.2
SB_9403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11) 29 5.7
SB_3202| Best HMM Match : AFP (HMM E-Value=2.9) 29 5.7
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_58967| Best HMM Match : Sec23_BS (HMM E-Value=5.9) 28 7.5
SB_54503| Best HMM Match : DUF753 (HMM E-Value=4.7) 28 7.5
SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8) 28 7.5
SB_51967| Best HMM Match : Wzy_C (HMM E-Value=7.3) 28 7.5
SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07) 28 7.5
SB_48986| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_48422| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014) 28 7.5
SB_38774| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_38425| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_36014| Best HMM Match : DUF437 (HMM E-Value=6.4) 28 7.5
SB_35151| Best HMM Match : DUF589 (HMM E-Value=7.5) 28 7.5
SB_34685| Best HMM Match : RNA_pol_A_bac (HMM E-Value=1.8) 28 7.5
SB_31889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_21523| Best HMM Match : Pkinase (HMM E-Value=9.5e-14) 28 7.5
SB_20847| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18538| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18411| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_18158| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_15818| Best HMM Match : Apo-VLDL-II (HMM E-Value=1.2) 28 7.5
SB_14744| Best HMM Match : 7tm_1 (HMM E-Value=4e-11) 28 7.5
SB_7261| Best HMM Match : RHS (HMM E-Value=5.3) 28 7.5
SB_3671| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_2384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_751| Best HMM Match : rve (HMM E-Value=7.5e-12) 28 7.5
SB_58440| Best HMM Match : Ribosomal_L9_C (HMM E-Value=0.81) 28 7.5
SB_56970| Best HMM Match : Thaumatin (HMM E-Value=5.4) 28 7.5
SB_55954| Best HMM Match : TIL (HMM E-Value=0.74) 28 7.5
SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5) 28 7.5
SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2) 28 7.5
SB_53044| Best HMM Match : TcpA (HMM E-Value=3.1) 28 7.5
SB_50818| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_50222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_49899| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_49895| Best HMM Match : NACHT (HMM E-Value=7.7) 28 7.5
SB_49629| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_46484| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_43722| Best HMM Match : TPR_4 (HMM E-Value=0.69) 28 7.5
SB_42300| Best HMM Match : Filament_head (HMM E-Value=4.9) 28 7.5
SB_42133| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_41358| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9) 28 7.5
SB_39208| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_38558| Best HMM Match : TFIIA_gamma_N (HMM E-Value=7.4) 28 7.5
SB_36723| Best HMM Match : DUF753 (HMM E-Value=9.9) 28 7.5
SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5) 28 7.5
SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2) 28 7.5
SB_32900| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_31865| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_30521| Best HMM Match : DUF333 (HMM E-Value=9.4) 28 7.5
SB_29851| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_24102| Best HMM Match : DUF753 (HMM E-Value=9.4) 28 7.5
SB_23875| Best HMM Match : Porin_3 (HMM E-Value=3.22299e-44) 28 7.5
SB_22914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 28 7.5
SB_20904| Best HMM Match : Filament_head (HMM E-Value=10) 28 7.5
SB_19009| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=2.3) 28 7.5
SB_16182| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_12140| Best HMM Match : ATP-synt_F (HMM E-Value=0.21) 28 7.5
SB_12114| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_10984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_8429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_5632| Best HMM Match : XRN_N (HMM E-Value=3.9) 28 7.5
SB_5073| Best HMM Match : Rhomboid (HMM E-Value=3.3) 28 7.5
SB_4528| Best HMM Match : Antistasin (HMM E-Value=8.4) 28 7.5
SB_4508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_1283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_1178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0) 28 9.9
SB_29517| Best HMM Match : Transposase_33 (HMM E-Value=6.9) 28 9.9
>SB_14570| Best HMM Match : Mab-21 (HMM E-Value=0.00069)
Length = 639
Score = 38.3 bits (85), Expect = 0.007
Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 1/93 (1%)
Frame = +2
Query: 506 QKTDEVRSWRISMQNQE-RLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIKTLFLFEI 682
Q DE WR+S E RL T R L L+K ++ I+SYF+K L +E
Sbjct: 250 QVMDEFE-WRMSFSLAENRLAQSLTPVQRHTLVLLKIIKKVYFPEVISSYFLKNLLFWEC 308
Query: 683 VKVDDITFWSKNSPSKLFKLMVSRLHESSLAGN 781
+ +FW + K M+ RL + GN
Sbjct: 309 ENNGE-SFWKGTTSGKCLLRMLDRLQDCFEKGN 340
>SB_25577| Best HMM Match : Mab-21 (HMM E-Value=1e-05)
Length = 492
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Frame = +2
Query: 530 WRISMQNQERLLM-HKTNNLRPALRLMKKL--RDAQGMNAIASYFIKTLFLFEIVKVDDI 700
WR+S N E+ L H T +R + K + ++ N ++SY++KT+FL++ ++
Sbjct: 371 WRLSFSNAEKTLFAHMTELMRHCFCVFKGIYYQELTTPNVLSSYYLKTIFLWKCERMPMN 430
Query: 701 TFWSKNSPSKLFKLMVSRLH 760
+ +N + L+ LH
Sbjct: 431 VWVERNVAQVIMGLLDDLLH 450
>SB_51861| Best HMM Match : RVT_1 (HMM E-Value=1.2e-10)
Length = 1318
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 19 CFHEKTNNRNESDIKFEPRHAGYVQLKMGPQFQNLPMRDGVDWQINKTAYL 171
CF +KT E ++ +P Q M P N P+R+G ++NK AYL
Sbjct: 742 CFQDKTGEPIEFKLEMDPEATPVAQRPMLPTTCNNPLRNGSIRELNK-AYL 791
>SB_6743| Best HMM Match : Mab-21 (HMM E-Value=0.086)
Length = 412
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Frame = +3
Query: 315 SQSGPAETLIITNKS------KGFSLSVDLVPALKFPENRWP 422
+ +GPA TL+IT + K LS+DLVPAL F + P
Sbjct: 204 TDNGPATTLVITYREGDKPQEKNRRLSIDLVPALLFKDKTKP 245
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/74 (25%), Positives = 37/74 (50%)
Frame = +1
Query: 421 RSRSSTDKYPRIAAKVPGSLSANRIRRPPKNRRSPVVAYIHAEPGEALDAQDQ*SATSLA 600
R ++ +A+ ++S +I + + RRS VA + A+ A+ + +A + A
Sbjct: 1222 RQLGDIERTKHVASAQQETVSLAQILKARQARRSAAVASMEAQNAVAMVRSETAAAVAKA 1281
Query: 601 TDEEVERRARHERD 642
TDE V R+R + +
Sbjct: 1282 TDELVRIRSREKSE 1295
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -3
Query: 543 MDIRHDRTS---SVFWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAP 391
+DIR DR + S W P V R A +Y+ VFVG + I+F E AP
Sbjct: 12 LDIRPDRQTVMTSATWPP--GVQRMADQYMTDPVRVFVGCLDLNVIEFIEGMAP 63
>SB_23651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1174
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Frame = +1
Query: 472 GSLSA-NRIRRPPK---NRRSPVVAYIHAEPGE-ALDAQDQ*SATSLATDEEVERRARHE 636
GS++A +R+RR + NRRS VAY+ + E A+ + + + +EEVE R +
Sbjct: 1018 GSMTAQSRVRRQRRLRENRRSTGVAYMPTDEAEDDSTAEARAAKRNTKVNEEVEERPSYR 1077
Query: 637 RDR 645
R R
Sbjct: 1078 RSR 1080
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 632 MNAIASYFIKTLFLFEIVKVDDITFWSKNSPSKLFKLMV 748
MN A+Y I TLFLF++ D I F + ++ +F M+
Sbjct: 154 MNEQATYQITTLFLFQLTYADIILFSTSDTFESMFPGML 192
>SB_9403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Frame = +2
Query: 530 WRISMQNQERLLMHKTNNLRPA--LRLMKKL--RDAQGMNAIASYFIKTLFLFEIVKVDD 697
W+I N +R L+H N A LR++K L D AI +++ + ++ K
Sbjct: 437 WQIKFLNGQRALIHHEGNEAKAKCLRIVKVLCEVDLSYPKAIRPQYLENILMWASRKYWS 496
Query: 698 ITFWSK-NSPSKLFKLMVSRLHESSLAGN 781
+ W++ N P++ LM LH+ G+
Sbjct: 497 DSDWTEANLPARFLDLMAG-LHKCMKNGD 524
>SB_26017| Best HMM Match : Extensin_2 (HMM E-Value=0.11)
Length = 1704
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 380 GLGAGAEVSGKSMADHEAVPTNTPELPQRY 469
G+ A SG S+ H+A + P+LP RY
Sbjct: 409 GINAKLTFSGSSLPQHKAHDSTLPQLPGRY 438
>SB_3202| Best HMM Match : AFP (HMM E-Value=2.9)
Length = 460
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -2
Query: 679 FKQKQCFDEVTG-DRVHALRVSQLLHQSQGWSQIIGLVHQEPLLVLHGY 536
F + Q FDE+ G D +H Q ++ QG++++ G + LHG+
Sbjct: 34 FDELQGFDELHGFDELHGFNELQGFNELQGFNELQGFDELQGFDELHGF 82
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 462 CVRRKYRIRRHSPFRLRNC 480
>SB_58967| Best HMM Match : Sec23_BS (HMM E-Value=5.9)
Length = 123
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_54503| Best HMM Match : DUF753 (HMM E-Value=4.7)
Length = 141
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_53077| Best HMM Match : SRP54_N (HMM E-Value=1.8)
Length = 533
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 55 CVRRKYRIRRHSPFRLRNC 73
>SB_51967| Best HMM Match : Wzy_C (HMM E-Value=7.3)
Length = 185
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_50928| Best HMM Match : 7tm_2 (HMM E-Value=4.7e-07)
Length = 1127
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 636 CVRRKYRIRRHSPFRLRNC 654
>SB_48986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_48422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_40980| Best HMM Match : ANF_receptor (HMM E-Value=0.00014)
Length = 735
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 545 CVRRKYRIRRHSPFRLRNC 563
>SB_38774| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_38425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_36014| Best HMM Match : DUF437 (HMM E-Value=6.4)
Length = 240
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_35151| Best HMM Match : DUF589 (HMM E-Value=7.5)
Length = 297
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_34685| Best HMM Match : RNA_pol_A_bac (HMM E-Value=1.8)
Length = 143
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_31889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_21523| Best HMM Match : Pkinase (HMM E-Value=9.5e-14)
Length = 322
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_20847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_18538| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_18411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_18158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_15818| Best HMM Match : Apo-VLDL-II (HMM E-Value=1.2)
Length = 218
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_14744| Best HMM Match : 7tm_1 (HMM E-Value=4e-11)
Length = 372
Score = 28.3 bits (60), Expect = 7.5
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Frame = -1
Query: 605 SVARLVADYWSCASRASPGSAWIYATTGLRRFFGGLLIRFADKLPGTFAAIRGYLS---- 438
SV R+ A W R + +I + + GLL+ P F AI LS
Sbjct: 193 SVERMHATVWPLRHRNTKPRMYIVFI--MITWLSGLLLSGLTYAP-IFVAIGAALSFGLI 249
Query: 437 ---VLLRDRPSIFRKLQRRHQVHA*AKSFRFIRNDQRLRRT 324
VL+ +IF K++R+HQ+H + R I+ ++ L +T
Sbjct: 250 LFLVLVVSYATIFIKVKRQHQLHNQSHLQRTIQKERELAKT 290
>SB_7261| Best HMM Match : RHS (HMM E-Value=5.3)
Length = 137
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_3671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_2384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_751| Best HMM Match : rve (HMM E-Value=7.5e-12)
Length = 338
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_58440| Best HMM Match : Ribosomal_L9_C (HMM E-Value=0.81)
Length = 427
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_56970| Best HMM Match : Thaumatin (HMM E-Value=5.4)
Length = 200
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_55954| Best HMM Match : TIL (HMM E-Value=0.74)
Length = 172
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5)
Length = 248
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_53662| Best HMM Match : Protamine_P2 (HMM E-Value=9.2)
Length = 253
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 178 CVRRKYRIRRHSPFRLRNC 196
>SB_53044| Best HMM Match : TcpA (HMM E-Value=3.1)
Length = 195
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_50818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_50222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_49899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_49895| Best HMM Match : NACHT (HMM E-Value=7.7)
Length = 144
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_49629| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_46484| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_43722| Best HMM Match : TPR_4 (HMM E-Value=0.69)
Length = 199
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_42300| Best HMM Match : Filament_head (HMM E-Value=4.9)
Length = 152
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_42133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_41358| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_41085| Best HMM Match : Auxin_repressed (HMM E-Value=9)
Length = 206
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_39208| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_38558| Best HMM Match : TFIIA_gamma_N (HMM E-Value=7.4)
Length = 164
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_36723| Best HMM Match : DUF753 (HMM E-Value=9.9)
Length = 130
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_34424| Best HMM Match : RNase_U2 (HMM E-Value=7.5)
Length = 206
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_34007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1411
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_33833| Best HMM Match : DUF947 (HMM E-Value=0.2)
Length = 1106
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 904 CVRRKYRIRRHSPFRLRNC 922
>SB_32900| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_31865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_30521| Best HMM Match : DUF333 (HMM E-Value=9.4)
Length = 195
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_29851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_24102| Best HMM Match : DUF753 (HMM E-Value=9.4)
Length = 140
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_23875| Best HMM Match : Porin_3 (HMM E-Value=3.22299e-44)
Length = 270
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_22914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 252 CVRRKYRIRRHSPFRLRNC 270
>SB_20904| Best HMM Match : Filament_head (HMM E-Value=10)
Length = 110
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_19009| Best HMM Match : Sperm_Ag_HE2 (HMM E-Value=2.3)
Length = 157
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_16182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 162
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_12140| Best HMM Match : ATP-synt_F (HMM E-Value=0.21)
Length = 271
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_12114| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_10984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_8429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 188
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_5632| Best HMM Match : XRN_N (HMM E-Value=3.9)
Length = 766
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_5073| Best HMM Match : Rhomboid (HMM E-Value=3.3)
Length = 188
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_4528| Best HMM Match : Antistasin (HMM E-Value=8.4)
Length = 118
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_4508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_1283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 113
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_1210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 58 CVRRKYRIRRHSPFRLRNC 76
>SB_1178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 105
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 275 CIQRERR*VRHSPFSVRSC 331
C++R+ R RHSPF +R+C
Sbjct: 9 CVRRKYRIRRHSPFRLRNC 27
>SB_31002| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 1250
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 528 DRTSSVFWRPPYSVCRQAARYLCG--NSGVFVGTAS*SAIDFPETSAP 391
+ TSS +WR SV R+ + CG N + + T PE P
Sbjct: 563 ETTSSTYWRNQTSVKRRFVNFCCGVDNDDMIIKTEEACPFTMPEFLLP 610
>SB_29517| Best HMM Match : Transposase_33 (HMM E-Value=6.9)
Length = 201
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +3
Query: 315 SQSGPAETLIITNKSKGFSLSVDLVPALKFPENR 416
++ GPA TL + K L +DLVPAL F +++
Sbjct: 3 NKKGPAATLNVQATDK--ELDIDLVPALLFKDDK 34
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,851,459
Number of Sequences: 59808
Number of extensions: 608557
Number of successful extensions: 1749
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 1630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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