Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31056
(788 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical pr... 32 0.54
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 32 0.54
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 32 0.54
Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical ... 30 1.6
AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protei... 30 1.6
AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein. 30 1.6
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 28 6.6
U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in ge... 28 6.6
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 28 6.6
AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical... 28 6.6
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un... 28 8.8
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un... 28 8.8
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein. 28 8.8
>Z92822-9|CAL49448.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 548 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 661
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 164 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 548 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 661
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>Z82094-5|CAL49446.1| 576|Caenorhabditis elegans Hypothetical
protein ZK520.3b protein.
Length = 576
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 548 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 661
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 164 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 201
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical protein
ZK520.3a protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 548 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 661
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +2
Query: 548 NQERLLMHKTNNLRPALRLMKKLRDAQGMNAIASYFIK 661
NQ RLL+ N+ A+R++++ R +G +A +F+K
Sbjct: 971 NQVRLLLDPLNDPDEAVRVVRESRSIEGAKLVAKFFVK 1008
>Z82093-9|CAD27620.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 2740 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 2780
>Z82064-3|CAD27611.1| 2920|Caenorhabditis elegans Hypothetical protein
W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 2740 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 2780
>Z82064-1|CAB61036.1| 1223|Caenorhabditis elegans Hypothetical protein
W02B9.1a protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 1043 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 1083
>AL032638-2|CAD27619.1| 2920|Caenorhabditis elegans Hypothetical
protein W02B9.1b protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 2740 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 2780
>AJ307058-1|CAC38842.1| 2920|Caenorhabditis elegans HMR-1B protein
protein.
Length = 2920
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 2740 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 2780
>AF016854-1|AAB94553.1| 1223|Caenorhabditis elegans HMR-1 protein.
Length = 1223
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = -3
Query: 510 FWRPPYSVCRQAARYLCGNSGVFVGTAS*SAIDFPETSAPA 388
FW+ P+ C A + G+ G VG A+ S+PA
Sbjct: 1043 FWKGPFCTCNDGANAILGDDGQVVGCGETLAVSKLGISSPA 1083
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
Frame = -2
Query: 91 EHSRHVWVQ----ILYRSRFDYL 35
+H+RH+W+Q ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
Frame = -2
Query: 91 EHSRHVWVQ----ILYRSRFDYL 35
+H+RH+W+Q ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
Frame = -2
Query: 91 EHSRHVWVQ----ILYRSRFDYL 35
+H+RH+W+Q ILY+ RFD L
Sbjct: 1353 QHTRHLWLQSLILILYKYRFDQL 1375
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
Frame = -2
Query: 91 EHSRHVWVQ----ILYRSRFDYL 35
+H+RH+W+Q ILY+ RFD L
Sbjct: 134 QHTRHLWLQSLILILYKYRFDQL 156
>U80954-2|AAK77629.1| 977|Caenorhabditis elegans Defective in germ
line developmentprotein 3, isoform a protein.
Length = 977
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 402 FPENRWPITKQYRQIPPNCRKGTWQLVGKPNKEAAKKPTKSGRGVYPCRTRR 557
FP N + +R+ P+ R + Q + KP++ +P+ S YP T R
Sbjct: 596 FPVNEAEQHRNHRESSPSLR--STQEIRKPSRNMGNRPSSSTGSYYPSTTPR 645
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 4/23 (17%)
Frame = -2
Query: 91 EHSRHVWVQ----ILYRSRFDYL 35
+H+RH+W+Q ILY+ RFD L
Sbjct: 1356 QHTRHLWLQSLILILYKYRFDQL 1378
>AL117202-20|CAB57898.4| 1205|Caenorhabditis elegans Hypothetical
protein Y47D3A.26 protein.
Length = 1205
Score = 28.3 bits (60), Expect = 6.6
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = +3
Query: 333 ETLIITNKSKGFSLSVDLVPALKFPENRWPITKQYRQIPPNCRKGTWQLVGKPNKEAAKK 512
ET + T K +G +D L+ EN K+Y+++ R + + NKEA K+
Sbjct: 182 ETKMKTEKIQGLLKYID--ERLQTLENEKEDLKEYQKLDKTKRSVEYTMYDNTNKEAIKE 239
Query: 513 PTK 521
TK
Sbjct: 240 KTK 242
>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform a protein.
Length = 1837
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 771 NEDSCRRDTINLNSFEGLFLLQNVMSSTLTISNRNNVLMK*LAIAFMPCASLN 613
++DSC R T NL+ G F + + T VL+ +A F +N
Sbjct: 1140 DDDSCSRTTSNLSQLTGSFTAETINGVHSTSRGSPEVLLDNMASTFEQLRMIN 1192
>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 2, isoform b protein.
Length = 1839
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 771 NEDSCRRDTINLNSFEGLFLLQNVMSSTLTISNRNNVLMK*LAIAFMPCASLN 613
++DSC R T NL+ G F + + T VL+ +A F +N
Sbjct: 1142 DDDSCSRTTSNLSQLTGSFTAETINGVHSTSRGSPEVLLDNMASTFEQLRMIN 1194
>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
Length = 1839
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = -3
Query: 771 NEDSCRRDTINLNSFEGLFLLQNVMSSTLTISNRNNVLMK*LAIAFMPCASLN 613
++DSC R T NL+ G F + + T VL+ +A F +N
Sbjct: 1142 DDDSCSRTTSNLSQLTGSFTAETINGVHSTSRGSPEVLLDNMASTFEQLRMIN 1194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,837,527
Number of Sequences: 27780
Number of extensions: 460964
Number of successful extensions: 1357
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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