Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31055
         (730 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.9  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    22   4.4  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 541 LPEDEEEYLTKEFSSVYEDAQCERLSNMTKNEL 639
           LPEDEEE   +E      +  C+ + ++  N++
Sbjct: 540 LPEDEEEKKKREEDKAKFEGLCKVMKSILDNKV 572


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 418 IIVERGMSFRQN-NFTKAIISFRFFVSPPI 332
           +I   GM +R   +F ++I  + FFV PP+
Sbjct: 177 LIAMCGMYYRDECSFAESIPPYLFFVPPPL 206


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 418 IIVERGMSFRQN-NFTKAIISFRFFVSPPI 332
           +I   GM +R   +F ++I  + FFV PP+
Sbjct: 410 LIAMCGMYYRDECSFAESIPPYLFFVPPPL 439


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 418 IIVERGMSFRQN-NFTKAIISFRFFVSPPI 332
           +I   GM +R   +F ++I  + FFV PP+
Sbjct: 410 LIAMCGMYYRDECSFAESIPPYLFFVPPPL 439


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 15/58 (25%), Positives = 22/58 (37%)
 Frame = -1

Query: 280 ASPFLFDVSSTLAGFCFSTMDGAPTTGDCVGSPSSMIRLSASIRKQ*LINNTFFSVNY 107
           A+  L  VSS L GFC S   G       +     +  ++  I     + N    +NY
Sbjct: 68  ATSILLKVSSLLIGFCASIYVGTVWINTSINGTKFIEFINKLIEFDVKLQNVSLIINY 125


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +1

Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLL 657
           +YL   F + Y D + +R +   +N+   +YL+
Sbjct: 26  KYLRTNFPNFYNDFEVQRYTWKCENQKCVKYLV 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,736
Number of Sequences: 336
Number of extensions: 3191
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)