Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31055
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC006460-1|AAH06460.1| 359|Homo sapiens hexamethylene bis-aceta... 45 3e-04
AB021179-1|BAA36166.1| 359|Homo sapiens HEXIM1 protein protein. 45 3e-04
BC025970-1|AAH25970.1| 286|Homo sapiens HEXIM2 protein protein. 38 0.049
BC012474-1|AAH12474.1| 286|Homo sapiens hexamthylene bis-acetam... 38 0.049
BC003531-1|AAH03531.1| 286|Homo sapiens HEXIM2 protein protein. 38 0.049
AY598322-1|AAT06733.1| 286|Homo sapiens L3 protein. 38 0.049
AK056946-1|BAB71319.1| 286|Homo sapiens protein ( Homo sapiens ... 38 0.049
BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase... 30 7.4
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 30 7.4
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 30 7.4
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 30 7.4
AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated tran... 30 7.4
BC107761-1|AAI07762.1| 372|Homo sapiens USP34 protein protein. 30 9.8
BC062325-1|AAH62325.1| 424|Homo sapiens USP34 protein protein. 30 9.8
BC022783-1|AAH22783.1| 986|Homo sapiens USP34 protein protein. 30 9.8
AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific prot... 30 9.8
AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein. 30 9.8
AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein. 30 9.8
>BC006460-1|AAH06460.1| 359|Homo sapiens hexamethylene
bis-acetamide inducible 1 protein.
Length = 359
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 550 DEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQ 711
D E+L ++FS YE E L NM+K ELI+EYL LE + R +++
Sbjct: 258 DGSEFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLE 311
>AB021179-1|BAA36166.1| 359|Homo sapiens HEXIM1 protein protein.
Length = 359
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 550 DEEEYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQ 711
D E+L ++FS YE E L NM+K ELI+EYL LE + R +++
Sbjct: 258 DGSEFLQRDFSETYERYHTESLQNMSKQELIKEYLELEKCLSRMEDENNRLRLE 311
>BC025970-1|AAH25970.1| 286|Homo sapiens HEXIM2 protein protein.
Length = 286
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 699
E+ K+FS YE E L +K EL+++YL LE + + T R
Sbjct: 187 EFQRKDFSETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>BC012474-1|AAH12474.1| 286|Homo sapiens hexamthylene bis-acetamide
inducible 2 protein.
Length = 286
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 699
E+ K+FS YE E L +K EL+++YL LE + + T R
Sbjct: 187 EFQRKDFSETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>BC003531-1|AAH03531.1| 286|Homo sapiens HEXIM2 protein protein.
Length = 286
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 699
E+ K+FS YE E L +K EL+++YL LE + + T R
Sbjct: 187 EFQRKDFSETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>AY598322-1|AAT06733.1| 286|Homo sapiens L3 protein.
Length = 286
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 699
E+ K+FS YE E L +K EL+++YL LE + + T R
Sbjct: 187 EFQRKDFSETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>AK056946-1|BAB71319.1| 286|Homo sapiens protein ( Homo sapiens
cDNA FLJ32384 fis, clone SKMUS1000104, weakly similar to
Homo sapiens mRNA for HEXIM1 protein, complete cds. ).
Length = 286
Score = 37.5 bits (83), Expect = 0.049
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 559 EYLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTER 699
E+ K+FS YE E L +K EL+++YL LE + + T R
Sbjct: 187 EFQRKDFSETYERFHTESLQGRSKQELVRDYLELEKRLSQAEEETRR 233
>BC111559-1|AAI11560.1| 865|Homo sapiens LINE-1 type transposase
domain containing 1 protein.
Length = 865
Score = 30.3 bits (65), Expect = 7.4
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +1
Query: 388 DENSCPVQQ*SIFDGNSQT*TRKCVQYTSDAFSTHS*FQFCVDSDDNYFYALPEDEEEYL 567
+E +Q S F G++ + V+ TSD T +DS ++ + E+EEE
Sbjct: 434 EEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTF-----IDSVED---SESEEEEEGK 485
Query: 568 TKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQRMEE 723
+ E V + E+ ++ + E+ YL+ ++ + LVK K Q EE
Sbjct: 486 SSETGKVKTTSLTEKKASRRQKEIPFSYLVGDSGKKKLVKHQVVHKTQEEEE 537
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 30.3 bits (65), Expect = 7.4
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +1
Query: 388 DENSCPVQQ*SIFDGNSQT*TRKCVQYTSDAFSTHS*FQFCVDSDDNYFYALPEDEEEYL 567
+E +Q S F G++ + V+ TSD T +DS ++ + E+EEE
Sbjct: 434 EEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTF-----IDSVED---SESEEEEEGK 485
Query: 568 TKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQRMEE 723
+ E V + E+ ++ + E+ YL+ ++ + LVK K Q EE
Sbjct: 486 SSETGKVKTTSLTEKKASRRQKEIPFSYLVGDSGKKKLVKHQVVHKTQEEEE 537
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 30.3 bits (65), Expect = 7.4
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +1
Query: 388 DENSCPVQQ*SIFDGNSQT*TRKCVQYTSDAFSTHS*FQFCVDSDDNYFYALPEDEEEYL 567
+E +Q S F G++ + V+ TSD T +DS ++ + E+EEE
Sbjct: 434 EEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTF-----IDSVED---SESEEEEEGK 485
Query: 568 TKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQRMEE 723
+ E V + E+ ++ + E+ YL+ ++ + LVK K Q EE
Sbjct: 486 SSETGKVKTTSLTEKKASRRQKEIPFSYLVGDSGKKKLVKHQVVHKTQEEEE 537
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 30.3 bits (65), Expect = 7.4
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +1
Query: 388 DENSCPVQQ*SIFDGNSQT*TRKCVQYTSDAFSTHS*FQFCVDSDDNYFYALPEDEEEYL 567
+E +Q S F G++ + V+ TSD T +DS ++ + E+EEE
Sbjct: 320 EEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTF-----IDSVED---SESEEEEEGK 371
Query: 568 TKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQRMEE 723
+ E V + E+ ++ + E+ YL+ ++ + LVK K Q EE
Sbjct: 372 SSETGKVKTTSLTEKKASRRQKEIPFSYLVGDSGKKKLVKHQVVHKTQEEEE 423
>AB211065-1|BAD95492.1| 865|Homo sapiens ES cell associated
transcript 11 protein.
Length = 865
Score = 30.3 bits (65), Expect = 7.4
Identities = 29/112 (25%), Positives = 51/112 (45%)
Frame = +1
Query: 388 DENSCPVQQ*SIFDGNSQT*TRKCVQYTSDAFSTHS*FQFCVDSDDNYFYALPEDEEEYL 567
+E +Q S F G++ + V+ TSD T +DS ++ + E+EEE
Sbjct: 434 EEEEQTSEQDSTFQGHTLVDAKHEVEITSDGMETTF-----IDSVED---SESEEEEEGK 485
Query: 568 TKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERSKMQRMEE 723
+ E V + E+ ++ + E+ YL+ ++ + LVK K Q EE
Sbjct: 486 SSETGKVKTTSLTEKKASRRQKEIPFSYLVGDSGKKKLVKHQVVHKTQEEEE 537
>BC107761-1|AAI07762.1| 372|Homo sapiens USP34 protein protein.
Length = 372
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 66 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 112
>BC062325-1|AAH62325.1| 424|Homo sapiens USP34 protein protein.
Length = 424
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 118 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 164
>BC022783-1|AAH22783.1| 986|Homo sapiens USP34 protein protein.
Length = 986
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 680 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 726
>AJ586138-1|CAE51938.1| 3395|Homo sapiens ubiquitin-specific
proteinase 34 protein.
Length = 3395
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 3089 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 3135
>AB018272-1|BAA34449.1| 1196|Homo sapiens KIAA0729 protein protein.
Length = 1196
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 890 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 936
>AB011142-1|BAA25496.2| 3412|Homo sapiens KIAA0570 protein protein.
Length = 3412
Score = 29.9 bits (64), Expect = 9.8
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 562 YLTKEFSSVYEDAQCERLSNMTKNELIQEYLLLEAKFENLVKRTERS 702
+L K S V+ +A C L + LI +Y L++ F N V+ ++ S
Sbjct: 3106 FLLKVQSQVFSEANCANLISTLITNLISQYQNLQSDFSNRVEISKAS 3152
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,677,850
Number of Sequences: 237096
Number of extensions: 1644360
Number of successful extensions: 3587
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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