Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31053
         (743 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.5  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   6.0  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.0  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.0  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    21   7.9  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    21   7.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   7.9  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 490 TTSNNFWHPVAGYETFNFMTAVNP 419
           +TSNN WH   G  + N     NP
Sbjct: 370 STSNNRWHNNNGNNSNNHWRKNNP 393


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 319 IEFDSYIIPSNEIKNNEFRLLE 254
           ++F  Y+ P++  ++ +FRLLE
Sbjct: 61  MDFRCYLRPASGFQSLQFRLLE 82


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 319 IEFDSYIIPSNEIKNNEFRLLE 254
           ++F  Y+ P++  ++ +FRLLE
Sbjct: 121 MDFRCYLRPASGFQSLQFRLLE 142


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 319 IEFDSYIIPSNEIKNNEFRLLE 254
           ++F  Y+ P++  ++ +FRLLE
Sbjct: 121 MDFRCYLRPASGFQSLQFRLLE 142


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 435 MKLNVSYPATGCQKLFEVVDEHKLR 509
           M ++   P+TG Q + +VV  HKL+
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLK 78


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 435 MKLNVSYPATGCQKLFEVVDEHKLR 509
           M ++   P+TG Q + +VV  HKL+
Sbjct: 54  MYIHPDSPSTGEQWMQKVVSFHKLK 78


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 389 IWSFSWLTFDGIDRSHEVKR 448
           +WS  + TF GI+  H VK+
Sbjct: 97  LWSQLFSTFAGIEVLHVVKQ 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,160
Number of Sequences: 336
Number of extensions: 3441
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19819879
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)