Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31053
(743 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 128 6e-30
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 128 6e-30
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 128 6e-30
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 128 6e-30
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 128 6e-30
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 128 6e-30
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 115 8e-26
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 115 8e-26
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 106 3e-23
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 106 3e-23
BT003437-1|AAO39440.1| 1235|Drosophila melanogaster SD03652p pro... 30 2.9
AY274835-1|AAP31582.1| 1235|Drosophila melanogaster rigor mortis... 30 2.9
AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p pro... 30 2.9
AE013599-3048|AAF57440.3| 1235|Drosophila melanogaster CG30149-P... 30 2.9
AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-P... 30 2.9
AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-P... 30 2.9
BT016129-1|AAV37014.1| 642|Drosophila melanogaster GH19651p pro... 30 3.8
AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular prot... 30 3.8
AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA ... 30 3.8
BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p pro... 29 5.1
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGER 92
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGER 92
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGER 92
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGER 92
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 11 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 70
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 71 LTHGRVRLLLKKGHSCYRPRRTGER 95
Score = 54.8 bits (126), Expect = 1e-07
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 441 LNVSYPATGCQKLFEVVDEHKLRSF 515
LNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVF 30
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 128 bits (310), Expect = 6e-30
Identities = 58/85 (68%), Positives = 65/85 (76%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPRRDGER 709
LT+ RVRLL+ KGHSCYRPRR GER
Sbjct: 68 LTHGRVRLLLKKGHSCYRPRRTGER 92
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 115 bits (276), Expect = 8e-26
Identities = 51/61 (83%), Positives = 54/61 (88%)
Frame = +2
Query: 527 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 706
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 707 R 709
R
Sbjct: 61 R 61
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 115 bits (276), Expect = 8e-26
Identities = 51/61 (83%), Positives = 54/61 (88%)
Frame = +2
Query: 527 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 706
MG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ RVRLL+ KGHSCYRPRR GE
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRVRLLLKKGHSCYRPRRTGE 60
Query: 707 R 709
R
Sbjct: 61 R 61
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 106 bits (255), Expect = 3e-23
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPR 694
LT+ R+RLL K HSC+ PR
Sbjct: 68 LTHGRLRLL-KKIHSCFHPR 86
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 106 bits (255), Expect = 3e-23
Identities = 50/80 (62%), Positives = 58/80 (72%)
Frame = +2
Query: 455 PGNGMPEVVRSGGRAQASIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 634
P G ++ + +FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGV
Sbjct: 8 PATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGV 67
Query: 635 LTNSRVRLLMSKGHSCYRPR 694
LT+ R+RLL K HSC+ PR
Sbjct: 68 LTHGRLRLL-KKIHSCFHPR 86
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = +3
Query: 435 MKLNVSYPATGCQKLFEVVDEHKLRSF 515
MKLNVSYPATGCQKLFEVVDEHKLR F
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVF 27
>BT003437-1|AAO39440.1| 1235|Drosophila melanogaster SD03652p
protein.
Length = 1235
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 225 VYW*NNTIIYSNSRNSLFFISLD 293
VYW NN +I S SR+ LFF S++
Sbjct: 483 VYWLNNHVIVSLSRHQLFFWSVE 505
>AY274835-1|AAP31582.1| 1235|Drosophila melanogaster rigor mortis
protein.
Length = 1235
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 225 VYW*NNTIIYSNSRNSLFFISLD 293
VYW NN +I S SR+ LFF S++
Sbjct: 483 VYWLNNHVIVSLSRHQLFFWSVE 505
>AY051517-1|AAK92941.1| 731|Drosophila melanogaster GH16956p
protein.
Length = 731
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 565 MEGLCTSCRWRQRQARIPDETGRPDKQPC 651
++ L + R+R+R A + +ET P K+PC
Sbjct: 126 LQKLAAAMRYRKRDAAVKEETKTPVKEPC 154
>AE013599-3048|AAF57440.3| 1235|Drosophila melanogaster CG30149-PB
protein.
Length = 1235
Score = 30.3 bits (65), Expect = 2.9
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 225 VYW*NNTIIYSNSRNSLFFISLD 293
VYW NN +I S SR+ LFF S++
Sbjct: 483 VYWLNNHVIVSLSRHQLFFWSVE 505
>AE013599-2721|AAF57674.2| 731|Drosophila melanogaster CG30115-PC,
isoform C protein.
Length = 731
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 565 MEGLCTSCRWRQRQARIPDETGRPDKQPC 651
++ L + R+R+R A + +ET P K+PC
Sbjct: 126 LQKLAAAMRYRKRDAAVKEETKTPVKEPC 154
>AE013599-2720|AAF57673.2| 1593|Drosophila melanogaster CG30115-PD,
isoform D protein.
Length = 1593
Score = 30.3 bits (65), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 565 MEGLCTSCRWRQRQARIPDETGRPDKQPC 651
++ L + R+R+R A + +ET P K+PC
Sbjct: 988 LQKLAAAMRYRKRDAAVKEETKTPVKEPC 1016
>BT016129-1|AAV37014.1| 642|Drosophila melanogaster GH19651p
protein.
Length = 642
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 731 HPRTDLRFSLHRGAVCNMSGPLTSEDEHGCLSGRPVSSGILACRCRQRHEV 579
HP D +++ R A +++GPL S H LSG + + + RCR R E+
Sbjct: 103 HP--DYKYNAKRSAYGDLAGPLESIC-HRQLSGAEIFAVLKELRCRYRREL 150
>AF353512-1|AAK58866.1| 856|Drosophila melanogaster regular
protein.
Length = 856
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 731 HPRTDLRFSLHRGAVCNMSGPLTSEDEHGCLSGRPVSSGILACRCRQRHEV 579
HP D +++ R A +++GPL S H LSG + + + RCR R E+
Sbjct: 317 HP--DYKYNAKRSAYGDLAGPLESIC-HRQLSGAEIFAVLKELRCRYRREL 364
>AE013599-673|AAF59069.2| 856|Drosophila melanogaster CG8643-PA
protein.
Length = 856
Score = 29.9 bits (64), Expect = 3.8
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = -1
Query: 731 HPRTDLRFSLHRGAVCNMSGPLTSEDEHGCLSGRPVSSGILACRCRQRHEV 579
HP D +++ R A +++GPL S H LSG + + + RCR R E+
Sbjct: 317 HP--DYKYNAKRSAYGDLAGPLESIC-HRQLSGAEIFAVLKELRCRYRREL 364
>BT011042-1|AAR31113.1| 856|Drosophila melanogaster SD02665p
protein.
Length = 856
Score = 29.5 bits (63), Expect = 5.1
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = -1
Query: 731 HPRTDLRFSLHRGAVCNMSGPLTSEDEHGCLSGRPVSSGILACRCRQRHEV 579
HP D +++ R A ++GPL S H LSG + + + RCR R E+
Sbjct: 317 HP--DYKYNAKRSAYGELAGPLESIC-HRQLSGAEIFAVLKELRCRYRREL 364
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,784,619
Number of Sequences: 53049
Number of extensions: 637749
Number of successful extensions: 1456
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1410
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1454
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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