Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV31051
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 61 7e-10
U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical pr... 38 0.006
AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical ... 38 0.006
AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical ... 38 0.006
AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical ... 38 0.006
AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical ... 31 0.68
AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical pr... 29 4.8
X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein... 29 4.8
M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein... 29 4.8
M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein ( C.ele... 29 4.8
M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein ( C.ele... 29 4.8
D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein... 29 4.8
Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical pr... 28 6.3
U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein. 28 6.3
U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astaci... 28 8.4
AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical ... 28 8.4
AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical ... 28 8.4
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 257 FTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVAQTPINFSVVTKDA 436
FT +VG I+V + PV+GSP+TC ++DP ++ V +P G + P+ F+V +A
Sbjct: 1208 FTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGAIPKG--LLDKPVYFTVDASEA 1265
Query: 437 GVGELDV-VCE 466
GVG L+V VCE
Sbjct: 1266 GVGNLEVAVCE 1276
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 254 KFTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVAQTPINFSVVTKD 433
+FT +G TIEV PV GSP+ E DP V + GL + ++ + +V ++
Sbjct: 1622 EFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGL-SDQVLLRHATTINVDRRN 1680
Query: 434 AGVGELDV 457
AG GEL V
Sbjct: 1681 AGNGELQV 1688
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 93 SGLGLYQAQVNKVASFSIDTLGRPAREFDVVVSGPGSRALPVRCYQTKSG 242
SG GL +A VN+ A F I G + +SGP +R P+R SG
Sbjct: 73 SGPGLVRAPVNRTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSG 122
Score = 34.3 bits (75), Expect = 0.096
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 66 PHHGQEVAASGLG--LYQAQVNKVASFSIDTLGRPAREFDVVVSGPGSRALPVRCYQ 230
P + V +GL L AQ+ + F+ID + + + + +V+++ P LPVRCY+
Sbjct: 1558 PEIRETVEKTGLARELNSAQIGQKKGFTIDNINKSS-DCNVIITDPKGGPLPVRCYK 1613
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 257 FTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGL 376
F E G + + ++P++GSP+T DP +VIV+ L
Sbjct: 1806 FYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVIVNDL 1845
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 269 EVGQSTIEVLHLSKPVSGSPYTCESF---DPNRVIVSGLPTGN-IVAQTPINFSVVTKDA 436
E+G+ T+ + + + V GSP+ DP++V V G + I++ NF V T+ A
Sbjct: 2133 EIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKVRVYGPGVEHGILSLFKSNFVVETRGA 2192
Query: 437 GVGELDV 457
G G+L V
Sbjct: 2193 GAGQLTV 2199
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 514 GHTHRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGRSSSAAKCSGTGLAHAHVGKE 693
GH ++ P + I + YGG P+ GSP + R+ AK + + K
Sbjct: 1202 GHM-QINFTPAQVGDHEIDVRYGGVPVTGSPFTC-----RAYDPAKIKVGAIPKGLLDKP 1255
Query: 694 AAFTIHCAEDTSPTVEV 744
FT+ +E +EV
Sbjct: 1256 VYFTVDASEAGVGNLEV 1272
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 61.3 bits (142), Expect = 7e-10
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 257 FTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVAQTPINFSVVTKDA 436
FT +VG I+V + PV+GSP+TC ++DP ++ V +P G + P+ F+V +A
Sbjct: 1208 FTPAQVGDHEIDVRYGGVPVTGSPFTCRAYDPAKIKVGAIPKG--LLDKPVYFTVDASEA 1265
Query: 437 GVGELDV-VCE 466
GVG L+V VCE
Sbjct: 1266 GVGNLEVAVCE 1276
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +2
Query: 254 KFTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVAQTPINFSVVTKD 433
+FT +G TIEV PV GSP+ E DP V + GL + ++ + +V ++
Sbjct: 2040 EFTPEHLGTHTIEVTFGDVPVPGSPFKTEVIDPKNVEIRGL-SDQVLLRHATTINVDRRN 2098
Query: 434 AGVGELDV 457
AG GEL V
Sbjct: 2099 AGNGELQV 2106
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +3
Query: 93 SGLGLYQAQVNKVASFSIDTLGRPAREFDVVVSGPGSRALPVRCYQTKSG 242
SG GL +A VN+ A F I G + +SGP +R P+R SG
Sbjct: 73 SGPGLVRAPVNRTAQFDITGEGLELSDIQAKISGPDNREYPIRIIPRSSG 122
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 257 FTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGL 376
F E G + + ++P++GSP+T DP +VIV+ L
Sbjct: 2224 FYPEETGTYNVSIDFNNRPITGSPFTVNVVDPTKVIVNDL 2263
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/99 (21%), Positives = 45/99 (45%)
Frame = +2
Query: 218 KMLSNQVWLVASKFTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTGNIVA 397
K +S +W ++ +T G+ + +L + + GSP+ DP+ V V GL +
Sbjct: 1774 KKVSETLW--SAVWTPKVEGEHELSILVAGEQIPGSPFPIHVLDPSAVRVIGLKNAPVGV 1831
Query: 398 QTPINFSVVTKDAGVGELDVVCEAMGERRIRLPVDIRRM 514
+ + A + ++V G++ I P+ +++M
Sbjct: 1832 EQQFSVDYTNSGASIASVEV---RHGDQTI--PITVKKM 1865
Score = 32.7 bits (71), Expect = 0.29
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +2
Query: 269 EVGQSTIEVLHLSKPVSGSPYTCESF---DPNRVIVSGLPTGN-IVAQTPINFSVVTKDA 436
E+G+ T+ + + + V GSP+ DP++V V G + I++ NF V T+ A
Sbjct: 2551 EIGKHTLVIKYDDEHVKGSPFVVHVSLPPDPSKVRVYGPGVEHGILSLFKSNFVVETRGA 2610
Query: 437 GVGELDV 457
G G+L V
Sbjct: 2611 GAGQLTV 2617
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/77 (25%), Positives = 32/77 (41%)
Frame = +1
Query: 514 GHTHRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGRSSSAAKCSGTGLAHAHVGKE 693
GH ++ P + I + YGG P+ GSP + R+ AK + + K
Sbjct: 1202 GHM-QINFTPAQVGDHEIDVRYGGVPVTGSPFTC-----RAYDPAKIKVGAIPKGLLDKP 1255
Query: 694 AAFTIHCAEDTSPTVEV 744
FT+ +E +EV
Sbjct: 1256 VYFTVDASEAGVGNLEV 1272
Score = 28.7 bits (61), Expect = 4.8
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +3
Query: 21 GAPIDREPLLVDVHPPHHGQEVAASGLGLYQAQVNKVASFSIDTLGRPAREFDVVVSGPG 200
G P+ P +V H G V ASG L +AQ + A F + + + E DV+VSG
Sbjct: 1890 GVPLSDGPY--EVFISHLGT-VRASGDALRKAQRARTARFEVINVEQNRGELDVMVSGKT 1946
Query: 201 SR 206
R
Sbjct: 1947 PR 1948
>U39676-3|AAB37032.2| 941|Caenorhabditis elegans Hypothetical protein
C23F12.2 protein.
Length = 941
Score = 38.3 bits (85), Expect = 0.006
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +1
Query: 523 HRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGRSSSAAKCSGTGLAHAHVGKEAAF 702
H+V P Y+I++ + I GSP L + +S+ G L A VGK A+F
Sbjct: 788 HQVSFTPDGAGQYKIHVLFNRMEIKGSPFILDI---ADASSVSVYGENLRSASVGKTASF 844
Query: 703 TIHC----AEDTSPTVEV 744
+H A+D S V V
Sbjct: 845 MVHAIGAEAKDISAHVTV 862
Score = 34.3 bits (75), Expect = 0.096
Identities = 33/96 (34%), Positives = 43/96 (44%), Gaps = 14/96 (14%)
Frame = +2
Query: 257 FTINEVGQSTIEVLHLSKPVSGSPYTC--------------ESFDPNRVIVSGLPTGNIV 394
FT EVG I +L+ + + GSP+ C + FD V V GL G +V
Sbjct: 688 FTPQEVGLWRIGILYDGEHIRGSPFACQVYHLDRRSLITRRQVFDSGLVNVYGLDVG-LV 746
Query: 395 AQTPINFSVVTKDAGVGELDVVCEAMGERRIRLPVD 502
Q +NFSV AG G L V G R I L ++
Sbjct: 747 GQ-ELNFSVNASQAGHGNLSVTVFRHG-REIPLSIE 780
>AF100673-3|ABA00151.1| 950|Caenorhabditis elegans Hypothetical
protein Y66H1B.2c protein.
Length = 950
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 508 KDGHTHRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGR---SSSAAKCSGTGLAHA 678
+DG ++ +R P ++ I++T GAP+ SP L V G+ +A SG GL
Sbjct: 691 EDGESYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKG 749
Query: 679 HVGKEAAFTIHCA 717
G++ F I+ A
Sbjct: 750 TTGQKCEFVINTA 762
>AF100673-2|AAU05553.1| 899|Caenorhabditis elegans Hypothetical
protein Y66H1B.2b protein.
Length = 899
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 508 KDGHTHRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGR---SSSAAKCSGTGLAHA 678
+DG ++ +R P ++ I++T GAP+ SP L V G+ +A SG GL
Sbjct: 640 EDGESYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKG 698
Query: 679 HVGKEAAFTIHCA 717
G++ F I+ A
Sbjct: 699 TTGQKCEFVINTA 711
>AF100673-1|AAP13733.1| 897|Caenorhabditis elegans Hypothetical
protein Y66H1B.2a protein.
Length = 897
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +1
Query: 508 KDGHTHRVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSGR---SSSAAKCSGTGLAHA 678
+DG ++ +R P ++ I++T GAP+ SP L V G+ +A SG GL
Sbjct: 638 EDGESYAMRFVPKETGNHFIHVTLDGAPMRESPFRLRV-GGKDLCDPTAISASGDGLVKG 696
Query: 679 HVGKEAAFTIHCA 717
G++ F I+ A
Sbjct: 697 TTGQKCEFVINTA 709
>AF100673-5|AAC69000.1| 1084|Caenorhabditis elegans Hypothetical
protein Y66H1B.3 protein.
Length = 1084
Score = 31.5 bits (68), Expect = 0.68
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 254 KFTINEVGQSTIEVLHLSKPVSGSPYTCESFD 349
+FT +EVG TI+V + P+ SP+T +S +
Sbjct: 889 RFTPSEVGNYTIDVTYQDIPIERSPFTLQSVE 920
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +3
Query: 84 VAASGLGLYQAQVNKVASFSIDTLGRPAREFDVVVSGPGSRALPVRCYQTKSGLLQ 251
V SG GL + SIDT + DV V GP P+ C + G+L+
Sbjct: 962 VTVSGPGLGPLVAQRSTYVSIDTTNAGFGDIDVYVDGP--TRTPLHCVDNQDGILK 1015
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 359 VIVSGLPTGNIVAQTPINFSVVTKDAGVGELDV 457
V VSG G +VAQ S+ T +AG G++DV
Sbjct: 962 VTVSGPGLGPLVAQRSTYVSIDTTNAGFGDIDV 994
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 526 RVRLRPTVPSHYRIYITYGGAPILGSPISLGVLSG 630
RVR P+ +Y I +TY PI SP +L + G
Sbjct: 887 RVRFTPSEVGNYTIDVTYQDIPIERSPFTLQSVEG 921
>AL032627-8|CAB63354.2| 373|Caenorhabditis elegans Hypothetical
protein Y41C4A.5 protein.
Length = 373
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 271 SWTEYYRGFTSIQAGIRESIHMRV--LRPKQSYSFWFTNW 384
S+ Y+GF S+ S+H+RV LR Y+ WF +W
Sbjct: 43 SYLHLYQGFNSVYEKSPLSLHIRVQYLRNSIIYNSWFGSW 82
>Z81589-7|CAB61028.1| 63|Caenorhabditis elegans Hypothetical
protein T08G5.10 protein.
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>X53245-1|CAA37335.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>M92910-1|AAA28111.1| 63|Caenorhabditis elegans metallothionein-2
protein.
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>M32387-1|AAA28118.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-2, complete cds.).
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>M32386-1|AAA28117.1| 63|Caenorhabditis elegans protein (
C.elegans metallothionein-like protein (MT-Ce) mRNA,
clone MTCe-1, complete cds.).
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>D17365-1|BAA04181.1| 63|Caenorhabditis elegans metallothionein-II
protein.
Length = 63
Score = 28.7 bits (61), Expect = 4.8
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 385 KYCCPNANQFQCCDKG 432
+YCCP A++ +CC G
Sbjct: 31 QYCCPTASEKKCCKSG 46
>Z92834-8|CAB07394.2| 1589|Caenorhabditis elegans Hypothetical
protein F39B2.4b protein.
Length = 1589
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 225 NILRAVLESQVQRRPRRI-PEQVD 157
NILR +LESQ++R P + PEQV+
Sbjct: 165 NILRYILESQLRRLPYSLSPEQVN 188
>Z92834-7|CAB07385.2| 1587|Caenorhabditis elegans Hypothetical
protein F39B2.4a protein.
Length = 1587
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 225 NILRAVLESQVQRRPRRI-PEQVD 157
NILR +LESQ++R P + PEQV+
Sbjct: 165 NILRYILESQLRRLPYSLSPEQVN 188
>Z68214-3|CAA92445.1| 399|Caenorhabditis elegans Hypothetical
protein C10C5.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 24 APIDREPLLVDVHPPHHGQEVAASGLGLYQAQVNKVAS 137
+P+ PLL H ++V G+ +YQ +N VA+
Sbjct: 359 SPLINTPLLAHAHNEFLNEKVFLRGIEIYQTLINNVAN 396
>U33051-1|AAA85507.1| 1587|Caenorhabditis elegans sur-2 protein.
Length = 1587
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -1
Query: 225 NILRAVLESQVQRRPRRI-PEQVD 157
NILR +LESQ++R P + PEQV+
Sbjct: 165 NILRYILESQLRRLPYSLSPEQVN 188
>U23525-3|AAC46566.2| 579|Caenorhabditis elegans Nematode astacin
protease protein11, isoform a protein.
Length = 579
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 512 SFGCQRAVGCDAHPSLHTPRLIHQHPR 432
SFGC G H ++H + HQH R
Sbjct: 418 SFGCDNNKGVAIHETMHALGVAHQHLR 444
>AF100673-4|AAP13734.2| 438|Caenorhabditis elegans Hypothetical
protein Y66H1B.5 protein.
Length = 438
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +2
Query: 314 VSGSPYTCE---SFDPNRVIVSGLPTGNIVAQTPINFSVVT 427
V GSP+ DP+++ +SGL N PINF + T
Sbjct: 127 VKGSPFKAVVDYKKDPSQITISGLDQPNYRLNQPINFVIDT 167
>AF016416-7|AAB65272.2| 307|Caenorhabditis elegans Hypothetical
protein F29A7.2 protein.
Length = 307
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 459 CVKRWVSVASDCPLTSEGWTHTQSAIASHCT 551
C +RW V + CPLTS ++ A S T
Sbjct: 2 CPRRWKGVPAGCPLTSLSFSLCSRAAKSRVT 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,393,748
Number of Sequences: 27780
Number of extensions: 486314
Number of successful extensions: 1399
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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