Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31051
         (765 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g49150.1 68418.m06083 hypothetical protein                          29   3.4  
At4g19180.1 68417.m02830 nucleoside phosphatase family protein /...    29   3.4  
At4g27710.1 68417.m03983 cytochrome P450 family protein contains...    29   4.5  
At3g22250.1 68416.m02812 UDP-glucoronosyl/UDP-glucosyl transfera...    29   4.5  
At1g07705.1 68414.m00830 NOT2/NOT3/NOT5 family protein contains ...    28   7.8  

>At5g49150.1 68418.m06083 hypothetical protein
          Length = 896

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +2

Query: 257 FTINEVGQS--TIEVLHLSKPVSGSPYTCESF----DPNRVIVSGLPTGNIVAQTPINFS 418
           FT++E G    T+  +  +K +S  PY    +    D +R IV+G      +A   + FS
Sbjct: 188 FTLSEPGNFLLTLSDMKHNKSISSMPYVYTVYIGYCDGSRSIVNGSGINASIAGESLGFS 247

Query: 419 VVTKDA 436
           V  KDA
Sbjct: 248 VYLKDA 253


>At4g19180.1 68417.m02830 nucleoside phosphatase family protein /
           GDA1/CD39 family protein low similarity to SP|O18956
           Ectonucleoside triphosphate diphosphohydrolase 1 (EC
           3.6.1.5) (Ecto-apyrase) {Bos taurus}; contains Pfam
           profile PF01150: GDA1/CD39 (nucleoside phosphatase)
           family
          Length = 740

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
 Frame = +3

Query: 21  GAPIDREPL-LVDVHPPHHGQEVAASGLGLYQAQVNKVASFSIDTLGRPAREF 176
           G   D +P  L D +P  HGQ  A SG  +     N  A  S+D +    REF
Sbjct: 449 GVDCDLQPCALPDGYPRPHGQFYAVSGFFVVYRFFNLSAEASLDDVLEKGREF 501


>At4g27710.1 68417.m03983 cytochrome P450 family protein contains
           Pfam profile: PF00067 cytochrome P450
          Length = 518

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 25/70 (35%), Positives = 32/70 (45%)
 Frame = -1

Query: 393 TIFPVGKPETITLFGSKDSHVYGLPDTGLDRCKTSIVLCPTSLIVNLLATSQTWFDNILR 214
           TI PV +PE   LFG   S + G  D   D  +   +L P   +  L A +Q   D  LR
Sbjct: 127 TIIPVKRPEVFILFGKGLSFIQG--D---DWIRHRRILNPAFSMDRLKAMTQPMGDCTLR 181

Query: 213 AVLESQVQRR 184
              E + QRR
Sbjct: 182 IFEEWRKQRR 191


>At3g22250.1 68416.m02812 UDP-glucoronosyl/UDP-glucosyl transferase
           family protein contains Pfam profile: PF00201
           UDP-glucoronosyl and UDP-glucosyl transferase
          Length = 461

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +2

Query: 230 NQVWLVASKFTINEVGQSTIEVLHLSKPVSGSPYTCESFDPNRVIVSGLPTG 385
           N V  ++    ++ +G+S I+ L L+   SG P+    +  NRV   GLP G
Sbjct: 283 NSVIYISFGSWVSPIGESNIQTLALALEASGRPFL---WALNRVWQEGLPPG 331


>At1g07705.1 68414.m00830 NOT2/NOT3/NOT5 family protein contains
           Pfam PF04153: NOT2 / NOT3 / NOT5 family; similar to Rga
           (GI:1658504) [Drosophila melanogaster]
          Length = 444

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 18  SGAPIDREPLLVDVHPPHHGQEVAASGLGL 107
           SG  +    +    HPP+H Q   A G+GL
Sbjct: 250 SGVSLHGSDIFSSSHPPYHSQTGGAPGIGL 279


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,346,607
Number of Sequences: 28952
Number of extensions: 458349
Number of successful extensions: 1301
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)