Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV31044
         (374 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   3.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   3.1  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   5.4  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   5.4  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   5.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    20   7.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    20   7.2  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 215 ARLPHGTPTTKRHRFNGMP 159
           + +P   P  K+H FN  P
Sbjct: 224 SNIPQNNPKNKQHNFNLPP 242


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/39 (17%), Positives = 18/39 (46%)
 Frame = +3

Query: 126 IGFLNVNFKFTRHSIEAVAFSCWCPVWQTCRVTVSAIRS 242
           + F  ++  +T  S +A  ++C   +   C +    +R+
Sbjct: 171 LAFACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRN 209


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 60  YITSA*RERLASALNKIRNRKSIGFLNVNFK 152
           Y+T A R  +ASAL     +  I F N   K
Sbjct: 277 YLTRARRIEIASALQLNETQVKIWFQNRRMK 307


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 60  YITSA*RERLASALNKIRNRKSIGFLNVNFK 152
           Y+T A R  +ASAL     +  I F N   K
Sbjct: 66  YLTRARRIEIASALQLNETQVKIWFQNRRMK 96


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +3

Query: 60  YITSA*RERLASALNKIRNRKSIGFLNVNFK 152
           Y+T A R  +ASAL     +  I F N   K
Sbjct: 66  YLTRARRIEIASALQLNETQVKIWFQNRRMK 96


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 168 IEAVAFSCWCPVWQTC 215
           I  V F CW P +  C
Sbjct: 280 IVLVFFVCWTPYYVMC 295


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +3

Query: 168 IEAVAFSCWCPVWQTC 215
           I  V F CW P +  C
Sbjct: 280 IVLVFFVCWTPYYVMC 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,303
Number of Sequences: 336
Number of extensions: 1611
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7828090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)